Hi Loris, just yesterday, I opened an issue concerning the very same problem, see:
https://github.com/easybuilders/easybuild-easyblocks/issues/1965 https://github.com/easybuilders/easybuild-easyblocks/pull/1967This adds the NetCDF-4 support. No MPI-IO and METIS ordering support yet, though. Maybe this should be added to the easyblock, too.
Best, Maik Am 19.02.20 um 16:29 schrieb Loris Bennett:
Hi,
I'm having difficulty getting tbtrans from Siesta to use NetCDF 4.
Apparently, when tbtrans is run it should print out
PARALLEL version
NetCDF support
NetCDF-4 support
NetCDF-4 MPI-IO support
METIS ordering support
but I just get
PARALLEL version
NetCDF support
The script to build the version of netCDF which comes with Siesta
implies that the following flags need to be set
FPPFLAGS += -DCDF -DNCDF -DNCDF_4
Thus I changed the following line in the Siesta easyblock from
(r"^(FPPFLAGS\s*=.*)$", r"\1 -DCDF $(NETCDF_INCLUDE)"),
to
(r"^(FPPFLAGS\s*=.*)$", r"\1 -DCDF -DNCDF -DNCDF_4
$(NETCDF_INCLUDE) "),
but I still don't get
NetCDF-4 support
The Siesta documentation also mentions setting
COMP_LIBS += libncdf.a libfdict.a
in order to compile against the Siesta version of NetCDF. This seems to
conflict with
libnetcdff.a
which is the static library provided by the EC for netCDF-Fortran.
Any ideas?
Cheers,
Loris
-- Maik Schmidt HPC Services Technische Universität Dresden Zentrum für Informationsdienste und Hochleistungsrechnen (ZIH) Andreas-Pfitzmann-Bau E049 D-01187 Dresden Telefon: +49 351 463-32836
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