"Loris Bennett" <[email protected]> writes:

> Hi Simon,
>
> Simon Branford <[email protected]> writes:
>
>> Hi,
>>
>> Do you specifically want R 4.4.0? Or is 4.4.1 fine?
>
> The user seems to be happy with 4.4.1.
>
>> I've PR-ed 4.4.1 (for foss/2023b) in 
>> https://github.com/easybuilders/easybuild-easyconfigs/pull/20898
>> And there is R-bundle-Bioconductor 3.19 in
>> https://github.com/easybuilders/easybuild-easyconfigs/pull/20913 to
>> go on top of this.
>
> Thanks! I'll give it a whirl.

I had to download opus-1.5.2.tar.gz by hand because the EC couldn't find
it, although the URL looked correct to me, but that seems to be a known issue.

The build ran overnight and had encountered an error.  I restarted the
build just now without looking at the error too carefully and got the
following:

  [build@admin easyconfigs]$ eb --from-pr 20898 --robot
  == Temporary log file in case of crash /tmp/eb-j1o9csl9/easybuild-hvbf3we6.log
  == found valid index for 
/trinity/shared/easybuild/software/EasyBuild/4.9.2/easybuild/easyconfigs, so 
using it...
  == found valid index for 
/trinity/shared/easybuild/software/EasyBuild/4.9.2/easybuild/easyconfigs, so 
using it...
  == R/4.4.1-gfbf-2023b is already installed (module found), skipping
  == resolving dependencies ...
  == processing EasyBuild easyconfig 
/trinity/shared/easybuild/software/EasyBuild/4.9.2/easybuild/easyconfigs/n/netCDF/netCDF-4.9.2-gompi-2023b.eb
  == building and installing netCDF/4.9.2-gompi-2023b...

Is the PR supposed to contain things other than R 4.4.1?  I wouldn't
have thought that netCDF had much to do with R.

> Cheers,
>
> Loris
>
>> Regards,
>> Simon
>>
>> -----Original Message-----
>> From: [email protected] <[email protected]> On 
>> Behalf Of Loris Bennett
>> Sent: Tuesday, July 9, 2024 8:05 AM
>> To: easybuild <[email protected]>
>> Subject: [easybuild] EC for R 4.4.0?
>>
>> CAUTION: This email originated from outside the organisation. Do not
>> click links or open attachments unless you recognise the sender and
>> know the content is safe.
>>
>>
>> Hi,
>>
>> Has anyone already written an EC for R 4.4.0?
>>
>> Cheers,
>>
>> Loris
>>
>> --
>> Dr. Loris Bennett (Herr/Mr)
>> FUB-IT (ex-ZEDAT), Freie Universität Berlin
-- 
Dr. Loris Bennett (Herr/Mr)
FUB-IT (ex-ZEDAT), Freie Universität Berlin

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