This gist shows the error in action:
https://gist.github.com/nik9000/3acdb38052dba3fbc5a0
Total - free on disk is 479163707392
But used is 238902736642
Meaning about 50% of used space isn't accounted for.
But everything on that partition is in elasticsearch's directory:
manybubbles@elastic1001:/var/lib/elasticsearch/production-search-eqiad/nodes/0/indices$
du -h | tail -n1
447G    .

Its like when we did the upgrade some files weren't deleted when they were
no longer in use.


On Thu, Aug 21, 2014 at 10:24 AM, Nikolas Everett <[email protected]> wrote:

> Hi Lee!  Thanks for responding.  Ok, here goes:
>
> Version: 1.2.1->1.3.2
> curl 'localhost:9200/_cat/health?v:
> epoch      timestamp cluster                 status node.total node.data
> shards  pri relo init unassign
> 1408630877 14:21:17  production-search-eqiad green          17        17
> 6050 2017    0    0        0
>
> curl 'localhost:9200/_cat/shards?v':
> https://gist.github.com/nik9000/815f3e39a3673e6f48ac
>
> I'll keep digging into it now that I'm properly awake as well.
>
> Nik
>
>
> On Thu, Aug 21, 2014 at 9:36 AM, Lee Hinman <[email protected]>
> wrote:
>
>> On Thursday, August 21, 2014 2:44:19 PM UTC+2, Nikolas Everett wrote:
>>>
>>> I started a rolling restart yesterday but has add to stop because the
>>> disks were filling up oddly. It looks like when the bode comes up it no
>>> longer deletes shards it can't use.
>>>
>>> Elasticsearch reports that the disk is nearly full but that it isn't
>>> using most of the space. When I look myself the disk is mostly full and
>>> most of the space is taken up by shards.
>>>
>>> I'm not clear where to go from here though. Find the files elasticsearch
>>> doesn't have open and delete them?
>>>
>>
>> Hi Nikolas,
>>
>> Can you provide the output of `curl 'localhost:9200/_cat/shards?v'` and
>> `curl 'localhost:9200/_cat/health?v'`? Also, can you describe your cluster
>> topology and what the current disk usages are for all nodes across the
>> cluster?
>>
>> Additionally, what version of ES are you using before and after the
>> upgrade?
>>
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>

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