Moving this to https://github.com/elasticsearch/elasticsearch/issues/7386
.  Its a bug, but I have no idea what caused it.

Side note: after digging through the code for two hours I can't find
anything that sweeps up files/directories/local shard storage that is
unused.  I see lots of deletes done in finally blocks but I'm not sure how
I got in this state nor if there is something designed to dig me out of it.

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