Hi Nicolas,

Thank you. Some nit-picks follow.

I made all the changes requested and merged in a single commit. See the attachment.

BTW, did you sign FSF papers already? I cannot find any reference in
org-contribute.org?

I did as of today. Waiting to get a reply from them on that.

Thanks,

Fred
>From 3eb282c554f8099627b748e7c4eb07d0e810a2ae Mon Sep 17 00:00:00 2001
From: Frederick Giasson <f...@fgiasson.com>
Date: Mon, 14 Nov 2016 15:43:16 -0500
Subject: [PATCH] Multiple improvements of ob-clojure have been performed in
 this commit.

  (1) better error handling. Errors and exceptions are output in the results 
section of a org-mode document. They were silenced with the previous version.
  (2) A new header parameter has been created: ":show-process" what will output 
the underlying NREPL processing in a new window + buffer

Note that the behavior of ob-clojure *did not change* with these modications.

Only the function (org-babel-execute:clojure) has been modified.
---
 etc/ORG-NEWS       |  32 ++++++++++++++++
 lisp/ob-clojure.el | 105 +++++++++++++++++++++++++++++++++++++++++------------
 2 files changed, 113 insertions(+), 24 deletions(-)

diff --git a/etc/ORG-NEWS b/etc/ORG-NEWS
index a360e35..95c97a7 100644
--- a/etc/ORG-NEWS
+++ b/etc/ORG-NEWS
@@ -27,6 +27,38 @@ into
 ** New features
 
 *** Horizontal rules are no longer ignored in LaTeX table math mode
+*** Org-babel-clojure :show-process
+
+A new block code header has been created for Org-babel-clojure that enables
+developers to output the process of an ongoing process into a new 
window/buffer.
+
+You can tell Org-babel-clojure to output the process of a running code block.
+
+To show that output you only have to specify the =:show-process= option
+in the code block's header like this:
+
+#+begin_example
+#+BEGIN_SRC clojure :results output :show-process
+  (dotimes [n 10]
+    (println n ".")
+    (Thread/sleep 500))
+#+END_SRC
+#+end_example
+
+If =:show-process= is specified that way, then when you will run the code using
+=C-c C-c= a new window will open in Emacs. Everything that is output
+by the REPL will immediately be added to that new window.
+
+When the processing of the code is finished, then the window and its
+buffer will be closed and the results will be reported in the
+=#+RESULTS= section. 
+
+Note that the =:results= parameter's behavior is *not* changed. If
+=silent= is specified, then no result will be displayed. If =output= is
+specified then all the output from the window will appears in the results
+section. If =value= is specified, then only the last returned value of
+the code will be displayed in the results section.
+
 
 * Version 9.0
 
diff --git a/lisp/ob-clojure.el b/lisp/ob-clojure.el
index 72ea77d..f78dd69 100644
--- a/lisp/ob-clojure.el
+++ b/lisp/ob-clojure.el
@@ -2,7 +2,7 @@
 
 ;; Copyright (C) 2009-2016 Free Software Foundation, Inc.
 
-;; Author: Joel Boehland, Eric Schulte, Oleh Krehel
+;; Author: Joel Boehland, Eric Schulte, Oleh Krehel, Frederick Giasson
 ;;
 ;; Keywords: literate programming, reproducible research
 ;; Homepage: http://orgmode.org
@@ -84,34 +84,91 @@
       body)))
 
 (defun org-babel-execute:clojure (body params)
-  "Execute a block of Clojure code with Babel."
+  "Execute a block of Clojure code with Babel. 
+   The underlying process performed by the code block can be output 
+   using the :show-process parameter."
   (let ((expanded (org-babel-expand-body:clojure body params))
-       result)
+        (sbuffer "*Clojure Show Process Sub Buffer*")
+       (show (assq :show-process params))
+       (response (list 'dict))
+        status
+        result)
     (cl-case org-babel-clojure-backend
       (cider
        (require 'cider)
        (let ((result-params (cdr (assq :result-params params))))
-        (setq result
-              (nrepl-dict-get
-               (nrepl-sync-request:eval
-                expanded (cider-current-connection) (cider-current-session))
-               (if (or (member "output" result-params)
-                       (member "pp" result-params))
-                   "out"
-                 "value")))))
-      (slime
-       (require 'slime)
-       (with-temp-buffer
-        (insert expanded)
-        (setq result
-              (slime-eval
-               `(swank:eval-and-grab-output
-                 ,(buffer-substring-no-properties (point-min) (point-max)))
-               (cdr (assq :package params)))))))
-    (org-babel-result-cond (cdr (assq :result-params params))
-      result
-      (condition-case nil (org-babel-script-escape result)
-       (error result)))))
+         ;; Check if the user want show the process in an output buffer/window.
+         (when show
+           ;; Create a new window with the show output buffer.
+           (switch-to-buffer-other-window sbuffer)
+
+           ;; Run the Clojure code in nREPL.
+           (nrepl-request:eval
+            expanded 
+            (lambda (resp) 
+              (when (member "out" resp)
+                ;; Print the output of the nREPL in the output buffer.
+                (princ (nrepl-dict-get resp "out") (get-buffer sbuffer)))
+              (when (member "ex" resp)
+                ;; In case there is an exception, then add it to the output 
buffer as well.
+                (princ (nrepl-dict-get resp "ex") (get-buffer sbuffer))
+                (princ (nrepl-dict-get resp "root-ex") (get-buffer sbuffer)))
+              (when (member "err" resp)
+                ;; In case there is an error, then add it to the output buffer 
as well.
+                (princ (nrepl-dict-get resp "err") (get-buffer sbuffer)))
+              (nrepl--merge response resp)
+              ;; Update the status of the nREPL output session.
+              (setq status (nrepl-dict-get response "status")))
+            (cider-current-connection) 
+            (cider-current-session))
+           
+           ;; Wait until the nREPL code finished to be processed.
+           (while (not (member "done" status))
+             (nrepl-dict-put response "status" (remove "need-input" status))
+             (accept-process-output nil 0.01)
+             (redisplay))
+
+           ;; Delete the show buffer & window when the processing is finalized.
+           (mapc #'delete-window (get-buffer-window-list sbuffer nil t))
+          (kill-buffer sbuffer)
+
+           ;; Put the output or the value in the result section of the code 
block.
+           (setq result (concat (nrepl-dict-get response 
+                                                (if (or (member "output" 
result-params)
+                                                        (member "pp" 
result-params))
+                                                    "out"
+                                                  "value"))
+                                (nrepl-dict-get response "ex")
+                                (nrepl-dict-get response "root-ex")
+                                (nrepl-dict-get response "err"))))
+         ;; Check if user want to run code without showing the process.
+         (unless show
+           (setq response (let ((nrepl-sync-request-timeout 
+                                 org-babel-clojure-sync-nrepl-timeout))
+                            (nrepl-sync-request:eval
+                             expanded (cider-current-connection) 
(cider-current-session))))
+           (setq result
+                 (concat 
+                  (nrepl-dict-get response (if (or (member "output" 
result-params)
+                                                   (member "pp" result-params))
+                                               "out"
+                                             "value"))
+                  (nrepl-dict-get response "ex")
+                  (nrepl-dict-get response "root-ex")
+                  (nrepl-dict-get response "err"))))))
+       (slime
+        (require 'slime)
+        (with-temp-buffer
+          (insert expanded)
+          (setq result
+                (slime-eval
+                 `(swank:eval-and-grab-output
+                   ,(buffer-substring-no-properties (point-min) (point-max)))
+                 (cdr (assq :package params)))))))
+      (org-babel-result-cond (cdr (assq :result-params params))
+        result
+        (condition-case nil (org-babel-script-escape result)
+          (error result)))))
 
 (provide 'ob-clojure)
 
-- 
1.9.5.msysgit.0

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