Thank you very much for your advice. On 2006/06/05, at 0:12, [EMAIL PROTECTED] wrote: > Dear Haruo, > >> ajindex.c: In function 'ajBtreeCacheNewC': >> ajindex.c:200: error: storage size of 'buf' isn't known >> ajindex.c: In function 'ajBtreeSecCacheNewC': >> ajindex.c:8234: error: storage size of 'buf' isn't known >> make[1]: *** [ajindex.lo] Error 1 >> make: *** [all-recursive] Error 1 > > That error shows that something went wrong when you tried to apply > the fixes from the ftp server. You are trying to compile the > original ajindex.c file. I'd suggest that you compare the file sizes > on your local system with those in the fixes directory and reapply > any fixes as appropriate. > > HTH > > Alan
Although I made sure if I replaced the old files with new files in the fixes directory and redo the 'make', I failed. % make *snip* /bin/sh ../libtool --tag=CC --mode=link gcc -O1 -o aaindexextract aaindexextract.o ../nucleus/libnucleus.la ../ajax/libajaxg.la ../ajax/ libajax.la ../plplot/libplplot.la -L/usr/X11R6/lib -lX11 -lm -lgd - lpng -lz -lm mkdir .libs libtool: link: warning: library `/usr/local/lib/libgd.la' was moved. libtool: link: warning: library `/usr/local/lib/libgd.la' was moved. libtool: link: cannot find the library `/opt/local/lib/libjpeg.la' make[2]: *** [aaindexextract] Error 1 make[1]: *** [all-recursive] Error 1 make: *** [all-recursive] Error 1 On 2006/06/04, at 17:58, Koen van der Drift wrote: > > On Jun 4, 2006, at 8:23 PM, [EMAIL PROTECTED] wrote: > >> dpkg: error processing /sw/fink/dists/unstable/main/binary-darwin- >> i386/graphics/libjpeg_6b-16_darwin-i386.deb (--install): >> package architecture (darwin-i386) does not match system (darwin- >> powerpc) >> dpkg: error processing /sw/fink/dists/unstable/main/binary-darwin- >> i386/graphics/libjpeg-bin_6b-16_darwin-i386.deb (--install): >> package architecture (darwin-i386) does not match system (darwin- >> powerpc) >> Errors were encountered while processing: >> /sw/fink/dists/unstable/main/binary-darwin-i386/graphics/ >> libjpeg_6b-16_darwin-i386.deb >> /sw/fink/dists/unstable/main/binary-darwin-i386/graphics/libjpeg- >> bin_6b-16_darwin-i386.deb >> ### execution of dpkg failed, exit code 1 >> Failed: can't batch-install packages: /sw/fink/dists/unstable/main/ >> binary-darwin-i386/graphics/libjpeg_6b-16_darwin-i386.deb /sw/fink/ >> dists/unstable/main/binary-darwin-i386/graphics/libjpeg- >> bin_6b-16_darwin-i386.deb > > > Haruo, > > That's an error for the libjpeg package in fink. I suggest you > contact the libjpeg package maintainer (%fink info libjpeg). > > good luck, > > - Koen. Begin forwarded message: > Actually, the problem is not with the libjpeg package in fink. The > problem is that you are somehow mixing the intel and powerpc > versions of fink. My guess is that you installed fink by using the > Fink-0.8.0-Installer? Unfortunately, that only works correctly on > powerpc. To install fink on intel, you must bootstrap it from > scratch, as mentioned on the fink homepage. If you have trouble > with this, please consult the mailing list fink- > [EMAIL PROTECTED] -------------------------------------- Let's start Yahoo! Auction - Free Campaign Now! http://pr.mail.yahoo.co.jp/auction/ _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
