> Thank you very much for your advice. > > On 2006/06/05, at 0:12, [EMAIL PROTECTED] wrote: >> Dear Haruo, >> >>> ajindex.c: In function 'ajBtreeCacheNewC': >>> ajindex.c:200: error: storage size of 'buf' isn't known >>> ajindex.c: In function 'ajBtreeSecCacheNewC': >>> ajindex.c:8234: error: storage size of 'buf' isn't known >>> make[1]: *** [ajindex.lo] Error 1 >>> make: *** [all-recursive] Error 1 >> >> That error shows that something went wrong when you tried to apply >> the fixes from the ftp server. You are trying to compile the >> original ajindex.c file. I'd suggest that you compare the file sizes >> on your local system with those in the fixes directory and reapply >> any fixes as appropriate. >> >> HTH >> >> Alan > > Although I made sure if I replaced the old files with new files > in the fixes directory and redo the 'make', I failed. > > % make > > *snip* > > /bin/sh ../libtool --tag=CC --mode=link gcc -O1 -o aaindexextract > aaindexextract.o ../nucleus/libnucleus.la ../ajax/libajaxg.la ../ajax/ > libajax.la ../plplot/libplplot.la -L/usr/X11R6/lib -lX11 -lm -lgd - > lpng -lz -lm > mkdir .libs > libtool: link: warning: library `/usr/local/lib/libgd.la' was moved. > libtool: link: warning: library `/usr/local/lib/libgd.la' was moved. > libtool: link: cannot find the library `/opt/local/lib/libjpeg.la' > make[2]: *** [aaindexextract] Error 1 > make[1]: *** [all-recursive] Error 1 > make: *** [all-recursive] Error 1 > > On 2006/06/04, at 17:58, Koen van der Drift wrote: >> >> On Jun 4, 2006, at 8:23 PM, [EMAIL PROTECTED] wrote: >> >>> dpkg: error processing /sw/fink/dists/unstable/main/binary-darwin- >>> i386/graphics/libjpeg_6b-16_darwin-i386.deb (--install): >>> package architecture (darwin-i386) does not match system (darwin- >>> powerpc) >>> dpkg: error processing /sw/fink/dists/unstable/main/binary-darwin- >>> i386/graphics/libjpeg-bin_6b-16_darwin-i386.deb (--install): >>> package architecture (darwin-i386) does not match system (darwin- >>> powerpc) >>> Errors were encountered while processing: >>> /sw/fink/dists/unstable/main/binary-darwin-i386/graphics/ >>> libjpeg_6b-16_darwin-i386.deb >>> /sw/fink/dists/unstable/main/binary-darwin-i386/graphics/libjpeg- >>> bin_6b-16_darwin-i386.deb >>> ### execution of dpkg failed, exit code 1 >>> Failed: can't batch-install packages: /sw/fink/dists/unstable/main/ >>> binary-darwin-i386/graphics/libjpeg_6b-16_darwin-i386.deb /sw/fink/ >>> dists/unstable/main/binary-darwin-i386/graphics/libjpeg- >>> bin_6b-16_darwin-i386.deb >> >> >> Haruo, >> >> That's an error for the libjpeg package in fink. I suggest you >> contact the libjpeg package maintainer (%fink info libjpeg). >> >> good luck, >> >> - Koen. > > > Begin forwarded message: > >> Actually, the problem is not with the libjpeg package in fink. The >> problem is that you are somehow mixing the intel and powerpc >> versions of fink. My guess is that you installed fink by using the >> Fink-0.8.0-Installer? Unfortunately, that only works correctly on >> powerpc. To install fink on intel, you must bootstrap it from >> scratch, as mentioned on the fink homepage. If you have trouble >> with this, please consult the mailing list fink- >> [EMAIL PROTECTED] > > > -------------------------------------- > Let's start Yahoo! Auction - Free Campaign Now! > http://pr.mail.yahoo.co.jp/auction/ > _______________________________________________ > EMBOSS mailing list > [email protected] > http://lists.open-bio.org/mailman/listinfo/emboss >
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