Hi, I don't get this problem. Showfeat displays CDS from both strands with EMBL and GenBank files. What is the source of your Genbankf file ? Maybe the format is not perfectly correct ?
David. [EMAIL PROTECTED] schrieb am 31/10/2006 13:18:36: > Hi! > I used the following command to extract only positions of CDS from gbk files: > showfeat -pos -matchtype CDS -width 0 > But I noticed that the program does not extract positions of CDS > that lie on the complementary strand, e.g. CDS > complement(5683..6459) did not show up in the resultant file. Any > ideas on how I can get showfeat to extract these positions too. > Shrish > Dr. Shrish Tiwari > E503, Centre for Cellular and Molecular Biology > Uppal Road, Hyderabad - 500 007, INDIA > Phone: 91-40-27192777 > Alternate email: [EMAIL PROTECTED] > > _______________________________________________ > EMBOSS mailing list > [email protected] > http://lists.open-bio.org/mailman/listinfo/emboss _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
