Hi I realized that coderet can extract the translation sequences succesfully (on a previous message I was asking for this feature using extractfeat) BUT theres a problem, coderet puts its own description on the fasta header for each sequences, so if there are 1000 translations it puts something like: >apo0009686_prot1 >apo0009686_prot2 >apo0009686_prot3 . . . >apo0009686_protn
And it would be pretty useful to have the protein_id for each sequence, instead of that descriptors. Is it possible? Regards, -- Andrés Pinzón cPh.D. http://groups.google.com/group/Bioinformatica_es Bioinformatics Center, Colombia EMBnet node http://bioinf.ibun.unal.edu.co Tel +57 3165000 ext 16961 Fax +571 3165415 Micology and Phytopathology Laboratory - Los Andes University. Tel +571 3394949 ext. 2768 _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
