Greeting wise ones,,
My name is Justin from Malaysia. I've just started a postgrad research on
accelerating bioinformatics applications.
My current task is to analyze and profile the smith-waterman algorithm. I dont
have much experience on C programming and am just picking up. I need to compile
water.c in Win XP. I'm currently using Visual Studio C++ Express and Dev-C++.
When trying to compile water.c, i encountered many problems... they were a lot
of linking errors and stuff... Plus i need to enable profiling info (gmon.out)
so that i can profile it using gprof.
Maybe i got off to a bad start.. so i want to try again properly.
Could you give me some guide/intructions on how to compile water.c? and where
do i find the complete list of header and function files needed to compile with
water.c?
Please advise.
Justin
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