Dear Xin, Hong, Xin wrote: > Dear support group members of EMBOSS, > > I have several types of errors during my test of installation of EMBOSS. I > tried on three different computers: desktop/Ubuntu, AIX5.0 (named as libra) > and x86_64/RHEL (called discern). Could anyone give us some hint? > > 1. segmentation fault:fcontml failed on all > > [libra02:discern_test]\% fcontml > Gene frequency and continuous character Maximum Likelihood > Input file: contml.dat > Uncaught exception: Allocation failed, insufficient memory available, raised > at ajstr.c:2083
Can you please send me the input file contml.dat > 2. no error message, create a empty file on discern: fconsense, ftreedist, > ftreedistpair > Please note, we install EMBOSS in 64 bits on dicern. They work fine on other > two computers. What was the ./configure commandline when you install? > 3. a wierd one: ememe. > > I am sure we installed MEME package. > > [discern:discern_test]\% ememe crp0.s -mod oops -revcomp ex2.html > Motif detection > sh: meme: command not found ememe will search for meme in the /bin/sh path, perhaps you installed it somewhere that is in your path when you login but not for this shell? You can define environment variable EMBOSS_MEME (uppercase, or put it into the emboss.defaults file) to point to the full path to meme. regards, Peter Rice _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
