Thanks. I didn¹t know CLC gave away anything. I printed out the manual(179 pages!), and it looks real spiffy. Must say that SeaView¹s gray background makes reading sequence difficult.
On 7/18/08 10:19 AM, "Andres Pinzon" <[EMAIL PROTECTED]> wrote: > Hi Nick, > It is also available on Ubuntu hardy. Have you ever used CLC sequence viewer? > > http://www.clcbio.com/index.php?id=28 > > Thats the editor we use here at the Colombia node, and I think it is one of > the most > intuitive tools I have ever tried. It has most of the seaview features (plus > some others) runs > under several platforms, is free and is really easy to install (no > dependencies, just java). > > The following address lists all the available features (for this and other CLC > versions): > > http://www.clcbio.com/index.php?id=89 > > Best, > > On Fri, Jul 18, 2008 at 7:48 AM, Guy Bottu <[EMAIL PROTECTED]> wrote: >> Staffa, Nick (NIH/NIEHS) wrote: >>> I would really appreciate any evaluation of the editor SEAVIEW by anyone >>> reading this. >>> Do you think SeaView is as good as SeqLab >> >> Dear Nick, >> >> Well, at the BEN site I installed SeaView as replacement, when we lost >> GCG+SeqLab. SeqLab does multiple sequence editing + graphical display of >> features + allows to execute programs on sequence (ranges). SeaView is >> basically just an editor (although it can call clustal or muscle to re-align >> portions of the aligment, and make a dotplot). What I find a great loss is >> that in SeqLab you can with the mouse select a block and then with one click >> delete it, while with SeaView you need to press as many time the <backspace> >> as there are columns to delete. But if you have nothing else SeaView is >> certainly not bad. It has the advantage to be freeware and that there are >> versions for several platforms. >> You can install it and test it yourself. It is in principle easy to install >> (although there might be problems with prerequisite libraries). You can >> obtain it from ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview (and in >> some LINUX distributions like Gentoo it is actually vailable). If you run >> into trouble I am willing to give some advice. >> >> Regards, >> Guy Bottu, >> Belgian EMBnet Node >> _______________________________________________ >> EMBOSS mailing list >> [email protected] >> http://lists.open-bio.org/mailman/listinfo/emboss > > _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
