Sorry,
the service, which provides EMBOSS tools as web interface, fails to
interprets properly the density ACD file.
Everything is fine in the ACD.
Hi,
colourps and cps are synonymous so you should be able to use either.
If you want to specify the output type from the command line
you could type:
density -quad -qgraph=colourps inputsequence
for a quad graph (qgraph, not ggraph in your email) or, for a dual graph
density -dual -dgraph=cps inputsequence
or am I misunderstanding your question?
HTH
Alan
Hi,
According to the ACD file, the density application seems to use the
'graph' qualifier.
When used, I get this error message:
Unknown qualifier -graph=colourps
graph seems to have been replaced by ggraph and dgraph.
And colourps seems to be cps now.
How to fix it in the source ?
Thanks
--
Sébastien Moretti
SIB EMBnet, Quartier Sorge - Genopode
CH-1015 Lausanne, Switzerland
Tel.: +41 (21) 692 4056/4221
http://ch.embnet.org/ http://myhits.vital-it.ch/
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