Hi all,
This isnt an EMBOSS question per se but I thought it would go to the right
audience.
After trimming a bunch of illumina reads I have sequences that are 12bp long and "we" want to find
their genomic location
Before anyone even says "Why do you want to do that?" can I suggest
1) Treat it as a hypothetical case
2) because the scientist who asked me wants it
:-)
I have both a perl regex and fuzznuc running now for oh about a week..........
I have also attempted to build/configure/run without success
maq
soap
blat
So can anyone suggest anything else to try (probably I have missed the obvious) before the regex and
fuzznuc finish?
This completes the Friday pm puzzler........
Cheers
Aengus
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Aengus Stewart
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