Hi, I have an odd problem. I am trying to search a multi-fasta set of proteins. If I do:
fuzzpro -sequence invertebrate.protein.faa -pattern CXXXXFYPXXXXXW -stdout -auto I get: Error: Sequence is not a protein fuzzpro -sequence invertebrate.protein.faa -pattern CXXXXFYPXXXXX -stdout -auto returns results. Any thoughts why? Is this a cryptic way of saying it can't find the motif or some other problem? I have tried this on Solaris 9 EMBOSS version 3.0 and Linux FC8 EMBOSS 6.0 and both give the same responses. Thanks for any help, Steve ------------------------------------------------------------------ Medical Sciences Division Weatherall Institute of Molecular Medicine/Sir William Dunn School Oxford University _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
