Hi
I am running RHEL 4 and just installed EMBOSS 6.0.1 in /usr/local/EMBOSS I downloaded ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.67.tar.gz and tried to install that. I used ./configure --prefix=/usr/local/EMBOSS and then tried make. The results are below. Any help? What is plplot.h? Thanks Mick -bash-3.00# make Making all in src make[1]: Entering directory `/usr/bioinfvm/PHYLIPNEW-3.67/src' gcc -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"PHYLIPNEW\" -DVERSION=\"3.67\" -DSTDC_HEADER S=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DHAVE_DIRENT_H=1 -DSTDC_HEADERS=1 -DHAVE_UNISTD_H=1 -DGETPGRP_VOID=1 -DHAVE_STRFTIME=1 -DHAVE_FORK=1 -DHAVE_VFORK=1 -DHAVE_WORKING_VFORK=1 -DHAVE_WORKING_ FORK=1 -DHAVE_VPRINTF=1 -DHAVE_STRDUP=1 -DHAVE_STRSTR=1 -DHAVE_STRCHR=1 -DHAVE_ERAND48=1 -DHAVE_MEMMOVE=1 -DHAVE_LIBM=1 -DPLD_png=1 -I. -I../include -I/usr/local/EMBOSS/incl ude -I/usr/local/EMBOSS/include/eplplot -DAJ_LinuxLF -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -DLENDIAN -I/usr/include//include -DNO_AUTH -O2 -MT clique.o -MD -MP -MF .deps/clique.Tpo -c -o clique.o clique.c In file included from /usr/local/include/emboss.h:5, from ../include/phylip.h:30, from clique.c:1: /usr/local/include/ajgraph.h:29:20: plplot.h: No such file or directory In file included from /usr/local/include/emboss.h:5, from ../include/phylip.h:30, from clique.c:1: /usr/local/include/ajgraph.h:81: error: syntax error before "xx0" /usr/local/include/ajgraph.h:82: error: syntax error before "xx0" /usr/local/include/ajgraph.h:84: error: syntax error before "xcentre" /usr/local/include/ajgraph.h:115: error: syntax error before "xx0" /usr/local/include/ajgraph.h:116: error: syntax error before "xx0" /usr/local/include/ajgraph.h:117: error: syntax error before '*' token /usr/local/include/ajgraph.h:135: error: syntax error before "PLFLT" /usr/local/include/ajgraph.h:146: error: syntax error before "xx1" /usr/local/include/ajgraph.h:147: error: syntax error before '*' token /usr/local/include/ajgraph.h:162: error: syntax error before "PLFLT" /usr/local/include/ajgraph.h:169: error: syntax error before "PLFLT" /usr/local/include/ajgraph.h:170: error: syntax error before "PLFLT" /usr/local/include/ajgraph.h:172: error: syntax error before "xx0" /usr/local/include/ajgraph.h:173: error: syntax error before "xx0" /usr/local/include/ajgraph.h:189: error: syntax error before "PLFLT" /usr/local/include/ajgraph.h:191: error: syntax error before "xx1" /usr/local/include/ajgraph.h:192: error: syntax error before "xx1" /usr/local/include/ajgraph.h:193: error: syntax error before "xx1" /usr/local/include/ajgraph.h:194: error: syntax error before "xx1" /usr/local/include/ajgraph.h:196: error: syntax error before "xx1" /usr/local/include/ajgraph.h:198: error: syntax error before "xx1" /usr/local/include/ajgraph.h:200: error: syntax error before "xx1" /usr/local/include/ajgraph.h:203: error: syntax error before "PLFLT" /usr/local/include/ajgraph.h:283: error: syntax error before "xcentre" /usr/local/include/ajgraph.h:285: error: syntax error before '*' token /usr/local/include/ajgraph.h:285: error: syntax error before "xcentre" /usr/local/include/ajgraph.h:287: error: syntax error before "xcentre" /usr/local/include/ajgraph.h:291: error: syntax error before "xcentre" /usr/local/include/ajgraph.h:294: error: syntax error before "ajGraphTextLength" /usr/local/include/ajgraph.h:294: error: syntax error before "xx1" /usr/local/include/ajgraph.h:296: error: syntax error before "ajGraphTextHeight" /usr/local/include/ajgraph.h:296: error: syntax error before "xx1" /usr/local/include/ajgraph.h:297: error: syntax error before "ajGraphDistPts" /usr/local/include/ajgraph.h:297: error: syntax error before "xx1" /usr/local/include/ajgraph.h:298: error: syntax error before "ajGraphFitTextOnLine" /usr/local/include/ajgraph.h:298: error: syntax error before "xx1" /usr/local/include/ajgraph.h:302: error: syntax error before "xcentre" make[1]: *** [clique.o] Error 1 make[1]: Leaving directory `/usr/bioinfvm/PHYLIPNEW-3.67/src' make: *** [all-recursive] Error 1 Head of Bioinformatics Institute for Animal Health Compton Berks RG20 7NN 01635 578411 Please consider the environment and don't print this e-mail unless you really need to. 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