michael watson (IAH-C) wrote:
When I run fdnaml from the command line it always prompts for a philip
tree, which is supposedly optional.
You can just hit return - if you do not give a tree file it will be ignored.
You can also use -auto to accept the defaults for any other options.
You can also put -nointreefile or -intreefile "" or -intreefile="" on the
command line.
"(optional)" in the prompt is just for information, there is nothing
automatic about it. Perhaps we can find a standard way to say that an empty
value is accepted (in the ACD file it has nullok set true).
Hope that helps,
Peter
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