Peter Rice wrote:
This can be done by adding some new output formats to the existing
phylipnew embassy applications. Phylip truncates id names for its own
formats. We can extend them, and only truncate for strict phylip format
outputs.
Interesting to note the following : standard PHYLIP format reserves the
first 10 characters for the name and has the sequence start at position
11. But some programmers like the one of PhyML use a format they call
PHYLIP, which however allows a name of any length but then demands that
there be a space between the name and the sequence. I already had
trouble when I used a standard PHYLIP file made by PHYLIP or EMBOSS with
a name of 10 characters as input to PhyML.
Guy Bottu
_______________________________________________
EMBOSS mailing list
[email protected]
http://lists.open-bio.org/mailman/listinfo/emboss
