Hi again Peter,
On 01/20/11 09:17, Stephen Taylor wrote:
Is there a bug in the gff3 output of fuzznuc?
##gff-version 3
##sequence-region chr21 1 46944323
#!Date 2011-01-20
#!Type DNA
#!Source-version EMBOSS 6.3.1
chr21 fuzznuc nucleotide_motif 13362906 13362942 37.000 + .
ID="chr21.1";note="*pat pattern"
It would be nice to actually show the pattern matched in the note field.
or both. What it shows is the "name" of the pattern, which usually
defaults to pattern.
Please can you define 'usually' i.e. What are the 'rules' for getting it to show the pattern? Usual behaviour when I run
it, is it shows note="*pat pattern".
Thanks,
Steve
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