Peter, Yes, what I generated for you was Windows-based, but we run EMBOSS on both Windows and Linux in Pipeline Pilot.
Regarding a patch, our next release is later in 2012, so whatever is more convenient for you regarding timing is fine with us. Scott -----Original Message----- From: Peter Rice [mailto:[email protected]] Sent: Tuesday, 06 December 06 2011 12:53 AM To: Scott Markel Cc: [email protected]; Kristine Briedis Subject: Re: HTML tag mismatch in acdtable output for fuzzpro Dear Scott, On 06/12/2011 00:35, Scott Markel wrote: > We use BioPerl to build EMBOSS command lines in Pipeline Pilot. After > updating BioPerl to 1.6.9 and EMBOSS to 6.4.0 we noticed a problem. There > are HTML tag mismatches that BioPerl, via XML::Twig, can't handle and skips. > In investigating a bit, it looks like there was a change in the acdtable > output. > And here are the three sets of tag mismatches in the HTML. All involve an > opening<th> and a closing</td>. Oops. Well spotted. Simple fix in ajax/acd/ajacd.c ... we have a new release due in January when our current funding ends, but will look to release a patch for you. From the version number, was this mEMBOSS you were using? regards, Peter Rice EMBOSS Team _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
