Halscope captures by placing its capture function in a hal thread.  In
the halscope gui, you are given no choice; from my read of the source
it's always added at position -1 in the thread which means "at the very
end".

If you want it in a different position, explicitly load the realtime
portion of scope and add it to a thread before loading halscope, as I
did here:

$ halrun
halcmd: loadrt threads
halcmd: loadrt siggen
halcmd: loadrt scope_rt
halcmd: addf scope.sample thread1 
halcmd: addf siggen.0.update thread1 
halcmd: show thread
Realtime Threads:
     Period  FP     Name               (     Time, Max-Time )
    1000000  YES               thread1 (        0,        0 )
                  1 scope.sample
                  2 siggen.0.update
halcmd: start
halcmd: loadusr halscope

Jeff

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