[Please keep fenics-support in Cc]
In your compile.log I see this:
[100%] Building CXX object
CMakeFiles/_d90675a333a0cf9426be4e77462853b0f4a37678.dir/d90675a333a0cf9426be4e77462853b0f4a37678PYTHON_wrap.cxx.o
/usr/bin/g++ -D_d90675a333a0cf9426be4e77462853b0f4a37678_EXPORTS
-fPIC -I/Applications/FEniCS.app/Contents/Resources/include
-I/usr/include/python2.7
-I/private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678
-o
CMakeFiles/_d90675a333a0cf9426be4e77462853b0f4a37678.dir/d90675a333a0cf9426be4e77462853b0f4a37678PYTHON_wrap.cxx.o
-c
/private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678/d90675a333a0cf9426be4e77462853b0f4a37678PYTHON_wrap.cxx
/private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678/d90675a333a0cf9426be4e77462853b0f4a37678PYTHON_wrap.cxx:150:10:
fatal error: 'Python.h' file not found
#include <Python.h>
^
1 error generated.
make[2]: ***
[CMakeFiles/_d90675a333a0cf9426be4e77462853b0f4a37678.dir/d90675a333a0cf9426be4e77462853b0f4a37678PYTHON_wrap.cxx.o]
Error 1
make[1]: *** [CMakeFiles/_d90675a333a0cf9426be4e77462853b0f4a37678.dir/all]
Error 2
make: *** [all] Error 2
The problem is that it cannot find Python.h, however, this file should
be in /usr/include/python2.7, which is included on the compile line
(-I/usr/include/python2.7). Can you verify that you have Python.h in
/usr/include/python2.7?
Johannes
[compile.log attached for reference]
On Mon, Jan 6, 2014 at 1:11 PM, 盛华山 <[email protected]> wrote:
> Thanks so much!
>
> ----- 原始邮件 -----
> 发件人: "Johannes Ring" <[email protected]>
> 收件人: "盛华山" <[email protected]>
> 抄送: [email protected]
> 发送时间: 星期一, 2014年 1 月 06日 下午 8:05:20
> 主题: Re: [FEniCS-support] Install problem on macbook pro os 10.9
>
> On Mon, Jan 6, 2014 at 12:53 PM, 盛华山 <[email protected]> wrote:
>> Hi
>> Thanks for helping me.
>> When I test demo_poisson.py (python demo_poisson.py) in Terminal, there
>> are some errors.
>>
>> I have installed :
>>
>> Xcode (the command line tool seems installed by itself) ;
>>
>> Xquartz(the connection of X11 on Download webside ?);
>>
>> sudo xcodebuild -license also done
>>
>> but still some errors: the message are
>>
>> Calling FFC just-in-time (JIT) compiler, this may take some time.
>> In instant.recompile: The module did not compile with command 'make
>> VERBOSE=1 ', see
>> '/Users/HSSheng/.instant/error/d90675a333a0cf9426be4e77462853b0f4a37678/compile.log'
>> Traceback (most recent call last):
>> File "demo_poisson.py", line 41, in
>> V = FunctionSpace(mesh, "Lagrange", 1)
>> File
>> "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/dolfin/functions/functionspace.py",
>> line 390, in init
>> FunctionSpaceBase.init(self, mesh, element, constrained_domain)
>> File
>> "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/dolfin/functions/functionspace.py",
>> line 84, in init
>> ufc_element, ufc_dofmap = jit(self._ufl_element)
>> File
>> "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/dolfin/compilemodules/jit.py",
>> line 66, in mpi_jit
>> return local_jit(*args, **kwargs)
>> File
>> "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/dolfin/compilemodules/jit.py",
>> line 154, in jit
>> return jit_compile(form, parameters=p, common_cell=common_cell)
>> File
>> "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/ffc/jitcompiler.py",
>> line 75, in jit
>> return jit_element(ufl_object, parameters)
>> File
>> "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/ffc/jitcompiler.py",
>> line 244, in jit_element
>> compiled_form, module, form_data, prefix = jit_form(form, parameters)
>> File
>> "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/ffc/jitcompiler.py",
>> line 212, in jit_form
>> cache_dir = cache_dir)
>> File
>> "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/ufc_utils/build.py",
>> line 64, in build_ufc_module
>> **kwargs)
>> File
>> "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/instant/build.py",
>> line 541, in build_module
>> recompile(modulename, module_path, new_compilation_checksum, build_system)
>> File
>> "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/instant/build.py",
>> line 150, in recompile
>> instant_error(msg % (cmd, compile_log_filename_dest))
>> File
>> "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/instant/output.py",
>> line 49, in instant_error
>> raise RuntimeError(text)
>> RuntimeError: In instant.recompile: The module did not compile with command
>> 'make VERBOSE=1 ', see
>> '/Users/HSSheng/.instant/error/d90675a333a0cf9426be4e77462853b0f4a37678/compile.log'
>
> Please attach the compile.log file.
>
> Johannes
-- The C compiler identification is Clang 5.0.0
-- The CXX compiler identification is Clang 5.0.0
-- Check for working C compiler: /usr/bin/gcc
-- Check for working C compiler: /usr/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/g++
-- Check for working CXX compiler: /usr/bin/g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Found SWIG: /Applications/FEniCS.app/Contents/Resources/bin/swig (found version "2.0.8")
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
DEBUG
-- Build files have been written to: /private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678
/Applications/FEniCS.app/Contents/Resources/bin/cmake -H/private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678 -B/private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678 --check-build-system CMakeFiles/Makefile.cmake 0
/Applications/FEniCS.app/Contents/Resources/bin/cmake -E cmake_progress_start /private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678/CMakeFiles /private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678/CMakeFiles/progress.marks
/Applications/Xcode.app/Contents/Developer/usr/bin/make -f CMakeFiles/Makefile2 all
/Applications/Xcode.app/Contents/Developer/usr/bin/make -f CMakeFiles/_d90675a333a0cf9426be4e77462853b0f4a37678.dir/build.make CMakeFiles/_d90675a333a0cf9426be4e77462853b0f4a37678.dir/depend
/Applications/FEniCS.app/Contents/Resources/bin/cmake -E cmake_progress_report /private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678/CMakeFiles 1
[ 50%] Swig source
/Applications/FEniCS.app/Contents/Resources/bin/cmake -E make_directory /private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678
/Applications/FEniCS.app/Contents/Resources/bin/swig -python -module d90675a333a0cf9426be4e77462853b0f4a37678 -shadow -modern -modernargs -fastdispatch -fvirtual -nosafecstrings -noproxydel -fastproxy -fastinit -fastunpack -fastquery -nobuildnone -outdir /private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678 -c++ -I/Applications/FEniCS.app/Contents/Resources/include -I/usr/include/python2.7 -I/Applications/FEniCS.app/Contents/Resources/include -I/private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678 -o /private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678/d90675a333a0cf9426be4e77462853b0f4a37678PYTHON_wrap.cxx /private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678/d90675a333a0cf9426be4e77462853b0f4a37678.i
cd /private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678 && /Applications/FEniCS.app/Contents/Resources/bin/cmake -E cmake_depends "Unix Makefiles" /private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678 /private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678 /private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678 /private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678 /private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678/CMakeFiles/_d90675a333a0cf9426be4e77462853b0f4a37678.dir/DependInfo.cmake --color=
Dependee "/private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678/CMakeFiles/_d90675a333a0cf9426be4e77462853b0f4a37678.dir/DependInfo.cmake" is newer than depender "/private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678/CMakeFiles/_d90675a333a0cf9426be4e77462853b0f4a37678.dir/depend.internal".
Dependee "/private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678/CMakeFiles/_d90675a333a0cf9426be4e77462853b0f4a37678.dir/depend.internal".
Scanning dependencies of target _d90675a333a0cf9426be4e77462853b0f4a37678
/Applications/Xcode.app/Contents/Developer/usr/bin/make -f CMakeFiles/_d90675a333a0cf9426be4e77462853b0f4a37678.dir/build.make CMakeFiles/_d90675a333a0cf9426be4e77462853b0f4a37678.dir/build
/Applications/FEniCS.app/Contents/Resources/bin/cmake -E cmake_progress_report /private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678/CMakeFiles 2
[100%] Building CXX object CMakeFiles/_d90675a333a0cf9426be4e77462853b0f4a37678.dir/d90675a333a0cf9426be4e77462853b0f4a37678PYTHON_wrap.cxx.o
/usr/bin/g++ -D_d90675a333a0cf9426be4e77462853b0f4a37678_EXPORTS -fPIC -I/Applications/FEniCS.app/Contents/Resources/include -I/usr/include/python2.7 -I/private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678 -o CMakeFiles/_d90675a333a0cf9426be4e77462853b0f4a37678.dir/d90675a333a0cf9426be4e77462853b0f4a37678PYTHON_wrap.cxx.o -c /private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678/d90675a333a0cf9426be4e77462853b0f4a37678PYTHON_wrap.cxx
/private/var/folders/fl/qv13001n0050ptwf_vc5g8680000gn/T/tmpLKiUDP2014-1-6-16-16_instant/d90675a333a0cf9426be4e77462853b0f4a37678/d90675a333a0cf9426be4e77462853b0f4a37678PYTHON_wrap.cxx:150:10: fatal error: 'Python.h' file not found
#include <Python.h>
^
1 error generated.
make[2]: *** [CMakeFiles/_d90675a333a0cf9426be4e77462853b0f4a37678.dir/d90675a333a0cf9426be4e77462853b0f4a37678PYTHON_wrap.cxx.o] Error 1
make[1]: *** [CMakeFiles/_d90675a333a0cf9426be4e77462853b0f4a37678.dir/all] Error 2
make: *** [all] Error 2
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