On Fri, Feb 7, 2014 at 11:27 AM, Jacopo Canton <[email protected]> wrote: > Dear all, > > I am trying to install fenics using dorsal on ubuntu 13.10. > Unfortunately I am having a problem with the installation of petsc, umfpack > to be precise. > The installation stops and issues the following error > > =============================================================================== > Compiling UMFPACK; this may take several minutes > > =============================================================================== > > TESTING: check from > config.libraries(/home/jack/BTSync/UNI/fenics/FEniCS/src/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) > TESTING: checkInclude from > config.headers(/home/jack/BTSync/UNI/fenics/FEniCS/src/petsc-3.4.2/config/BuildSystem/config/headers.py:86) > TESTING: checkSharedLibrary from > config.packages.UMFPACK(/home/jack/BTSync/UNI/fenics/FEniCS/src/petsc-3.4.2/config/BuildSystem/config/package.py:518) > TESTING: alternateConfigureLibrary from > config.packages.CHOLMOD(/home/jack/BTSync/UNI/fenics/FEniCS/src/petsc-3.4.2/config/BuildSystem/config/package.py:522) > TESTING: alternateConfigureLibrary from > PETSc.packages.oski(/home/jack/BTSync/UNI/fenics/FEniCS/src/petsc-3.4.2/config/BuildSystem/config/package.py:522) > TESTING: alternateConfigureLibrary from > PETSc.packages.SuperLU(/home/jack/BTSync/UNI/fenics/FEniCS/src/petsc-3.4.2/config/BuildSystem/config/package.py:522) > TESTING: alternateConfigureLibrary from > PETSc.packages.sundials(/home/jack/BTSync/UNI/fenics/FEniCS/src/petsc-3.4.2/config/BuildSystem/config/package.py:522) > TESTING: alternateConfigureLibrary from > PETSc.packages.elemental(/home/jack/BTSync/UNI/fenics/FEniCS/src/petsc-3.4.2/config/BuildSystem/config/package.py:522) > TESTING: alternateConfigureLibrary from > PETSc.packages.clique(/home/jack/BTSync/UNI/fenics/FEniCS/src/petsc-3.4.2/config/BuildSystem/config/package.py:522) > TESTING: configureLibrary from > PETSc.packages.ml(/home/jack/BTSync/UNI/fenics/FEniCS/src/petsc-3.4.2/config/BuildSystem/config/package.py:464) > TESTING: check from > config.libraries(/home/jack/BTSync/UNI/fenics/FEniCS/src/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) > ******************************************************************************* > UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for > details): > ------------------------------------------------------------------------------- > --with-ml-lib=['/home/jack/BTSync/UNI/fenics/FEniCS/lib/libml.so'] and > --with-ml-include=['/home/jack/BTSync/UNI/fenics/FEniCS/include/trilinos'] > did not work > ******************************************************************************* > > Failure with exit status: 1 > Exit message: There was a problem building petsc-3.4.2. > > > > The configure.log file is not of much help to me, but here it is: > > > #if defined(__cplusplus) > extern "C" { > } > #else > #endif > #endif > ******************************************************************************* > UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for > details): > ------------------------------------------------------------------------------- > --with-ml-lib=['/home/jack/BTSync/UNI/fenics/FEniCS/lib/libml.so'] and > --with-ml-include=['/home/jack/BTSync/UNI/fenics/FEniCS/include/trilinos'] > did not work > ******************************************************************************* > File "./config/configure.py", line 293, in petsc_configure > framework.configure(out = sys.stdout) > File > "/home/jack/BTSync/UNI/fenics/FEniCS/src/petsc-3.4.2/config/BuildSystem/config/framework.py", > line 933, in configure > child.configure() > File > "/home/jack/BTSync/UNI/fenics/FEniCS/src/petsc-3.4.2/config/BuildSystem/config/package.py", > line 556, in configure > self.executeTest(self.configureLibrary) > File > "/home/jack/BTSync/UNI/fenics/FEniCS/src/petsc-3.4.2/config/BuildSystem/config/base.py", > line 115, in executeTest > ret = apply(test, args,kargs) > File > "/home/jack/BTSync/UNI/fenics/FEniCS/src/petsc-3.4.2/config/BuildSystem/config/package.py", > line 484, in configureLibrary > for location, directory, lib, incl in self.generateGuesses(): > File > "/home/jack/BTSync/UNI/fenics/FEniCS/src/petsc-3.4.2/config/BuildSystem/config/package.py", > line 294, in generateGuesses > > '--with-'+self.package+'-include='+str(self.framework.argDB['with-'+self.package+'-include'])+' > did not work') > > > > The libml.so library and the include/trilins folder are where they should > be. > Can anyone help me, please?
Please send us the complete configure.log. Johannes _______________________________________________ fenics-support mailing list [email protected] http://fenicsproject.org/mailman/listinfo/fenics-support
