On 28 Mar 2014, at 13:02 , Imran Ali <[email protected]> wrote:
> On 2014-03-28 12:34, Johannes Ring wrote: >> On Thu, Mar 27, 2014 at 11:16 AM, Imran Ali >> <[email protected]> wrote: >>> I am trying to install FEniCS through Dorsal on Red Hat 6. >>> All the packages prior to dolfin have been successfully installed >>> (save Trillinos). Here is a list which pops up during the dolfin >>> installation : >>> -- The following optional packages were found: >>> -- ------------------------------------------- >>> -- (OK) OPENMP >>> -- (OK) MPI >>> -- (OK) PETSC >>> -- (OK) SLEPC >>> -- (OK) UMFPACK >>> -- (OK) SCOTCH >>> -- (OK) PARMETIS >>> -- (OK) CGAL >>> -- (OK) ZLIB >>> -- (OK) PYTHON >>> -- (OK) HDF5 >>> -- (OK) VTK >>> -- (OK) QT >>> -- >>> -- The following optional packages were not found: >>> -- ----------------------------------------------- >>> -- (**) PETSC4PY >>> -- (**) TAO >>> -- (**) TRILINOS >>> -- (**) CHOLMOD >>> -- (**) PASTIX >>> -- (**) SPHINX >>> -- >>> -- QVTK not found, disabling QT for plotting >>> -- QT not found, or QT/VTK not enabled in DOLFIN. Not building demo_plot-qt >>> -- Disabling generation of documentation because Sphinx is missing. >>> -- Configuring done >>> And the error message : >>> In file included from >>> /uio/hume/student-u29/imranal/Work/FEniCS/src/dolfin-1.3.0/dolfin/graph/BoostGraphOrdering.cpp:23: >>> /usr/include/boost/graph/compressed_sparse_row_graph.hpp:51:2: warning: >>> #warning "Using deprecated BGL compressed sparse row graph interface --" >>> /usr/include/boost/graph/compressed_sparse_row_graph.hpp:52:2: warning: >>> #warning "please see the documentation for the new interface and then" >>> /usr/include/boost/graph/compressed_sparse_row_graph.hpp:53:2: warning: >>> #warning "#define BOOST_GRAPH_USE_NEW_CSR_INTERFACE before including" >>> /usr/include/boost/graph/compressed_sparse_row_graph.hpp:54:2: warning: >>> #warning "<boost/graph/compressed_sparse_row_graph.hpp>" >>> In file included from >>> /uio/hume/student-u29/imranal/Work/FEniCS/src/dolfin-1.3.0/dolfin/graph/BoostGraphColoring.h:28, >>> from >>> /uio/hume/student-u29/imranal/Work/FEniCS/src/dolfin-1.3.0/dolfin/graph/GraphColoring.cpp:31: >>> /usr/include/boost/graph/compressed_sparse_row_graph.hpp:51:2: warning: >>> #warning "Using deprecated BGL compressed sparse row graph interface --" >>> /usr/include/boost/graph/compressed_sparse_row_graph.hpp:52:2: warning: >>> #warning "please see the documentation for the new interface and then" >>> /usr/include/boost/graph/compressed_sparse_row_graph.hpp:53:2: warning: >>> #warning "#define BOOST_GRAPH_USE_NEW_CSR_INTERFACE before including" >>> /usr/include/boost/graph/compressed_sparse_row_graph.hpp:54:2: warning: >>> #warning "<boost/graph/compressed_sparse_row_graph.hpp>" >>> /uio/hume/student-u29/imranal/Work/FEniCS/src/dolfin-1.3.0/dolfin/graph/BoostGraphOrdering.cpp: >>> In static member function ‘static std::vector<long unsigned int, >>> std::allocator<long unsigned int> > >>> dolfin::BoostGraphOrdering::compute_cuthill_mckee(const >>> std::set<std::pair<long unsigned int, long unsigned int>, >>> std::less<std::pair<long unsigned int, long unsigned int> >, >>> std::allocator<std::pair<long unsigned int, long unsigned int> > >&, size_t, >>> bool)’: >>> /uio/hume/student-u29/imranal/Work/FEniCS/src/dolfin-1.3.0/dolfin/graph/BoostGraphOrdering.cpp:87: >>> error: ‘edges_are_unsorted_multi_pass’ is not a member of ‘boost’ >>> /uio/hume/student-u29/imranal/Work/FEniCS/src/dolfin-1.3.0/dolfin/graph/BoostGraphOrdering.cpp: >>> In static member function ‘static T >>> dolfin::BoostGraphOrdering::build_csr_directed_graph(const X&)’: >>> /uio/hume/student-u29/imranal/Work/FEniCS/src/dolfin-1.3.0/dolfin/graph/BoostGraphOrdering.cpp:192: >>> error: ‘edges_are_unsorted_multi_pass’ is not a member of ‘boost’ >>> In file included from >>> /uio/hume/student-u29/imranal/Work/FEniCS/src/dolfin-1.3.0/dolfin/graph/GraphColoring.cpp:31: >>> /uio/hume/student-u29/imranal/Work/FEniCS/src/dolfin-1.3.0/dolfin/graph/BoostGraphColoring.h: >>> In static member function ‘static size_t >>> dolfin::BoostGraphColoring::compute_local_vertex_coloring(const >>> dolfin::Graph&, std::vector<T, std::allocator<_Tp1> >&)’: >>> /uio/hume/student-u29/imranal/Work/FEniCS/src/dolfin-1.3.0/dolfin/graph/BoostGraphColoring.h:79: >>> error: ‘edges_are_unsorted_multi_pass’ is not a member of ‘boost’ >>> make[2]: *** [dolfin/CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o] >>> Error 1 >>> make[2]: *** Waiting for unfinished jobs.... >>> make[2]: *** [dolfin/CMakeFiles/dolfin.dir/graph/GraphColoring.cpp.o] Error >>> 1 >>> make[2]: Leaving directory >>> `/uio/hume/student-u29/imranal/Work/FEniCS/src/dolfin-1.3.0/dorsal_build_dir' >>> make[1]: *** [dolfin/CMakeFiles/dolfin.dir/all] Error 2 >>> make[1]: Leaving directory >>> `/uio/hume/student-u29/imranal/Work/FEniCS/src/dolfin-1.3.0/dorsal_build_dir' >>> make: *** [all] Error 2 >>> make: Leaving directory >>> `/uio/hume/student-u29/imranal/Work/FEniCS/src/dolfin-1.3.0/dorsal_build_dir' >>> Failure with exit status: 2 >>> Exit message: There was a problem building dolfin-1.3.0. >> Which version of Boost are installed on your computer? >> Johannes > > The boost version is 1.41. I am told that version is too old to install > dolfin. Er, so they say “we support RHEL6”, except that they don’t? I’ll see what I can do about that. -- Terje Kvernes Driftsansvarlig Matematisk Institutt Universitetet i Oslo _______________________________________________ fenics-support mailing list [email protected] http://fenicsproject.org/mailman/listinfo/fenics-support
