hi,
Im tring to run cpp demos.. now this is all i have done.. making it
explicit so that i want to kknow if every thing is allright..
------------------------------------------------------------------------------------------------------------------------------------
login3$ mkdir build
login3$ cd build/
login3$ cmake ..
-- The C compiler identification is GNU 4.4.7
-- The CXX compiler identification is GNU 4.4.7
-- Check for working C compiler: /usr/bin/gcc
-- Check for working C compiler: /usr/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
CMake Warning at CMakeLists.txt:18 (find_package):
By not providing "FindDOLFIN.cmake" in CMAKE_MODULE_PATH this project has
asked CMake to find a package configuration file provided by "DOLFIN", but
CMake did not find one.
Could not find a package configuration file provided by "DOLFIN" with any
of the following names:
DOLFINConfig.cmake
dolfin-config.cmake
Add the installation prefix of "DOLFIN" to CMAKE_PREFIX_PATH or set
"DOLFIN_DIR" to a directory containing one of the above files. If
"DOLFIN"
provides a separate development package or SDK, be sure it has been
installed.
-- Configuring done
-- Generating done
-- Build files have been written to:
/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build
-------------------------------------------------
because of that warning i did the following thing and ran 'make ' command
incidentally make was successful
------------------cmake again for warnings------------------------------
ogin3$ export CMAKE_PREFIX_PATH=$CMAKE_PREFIX_PATH:/home1/03023/rajeswar/
login3$ cmake ..
-- Configuring done
CMake Warning at CMakeLists.txt:37 (add_executable):
Cannot generate a safe runtime search path for target demo_poisson because
files in some directories may conflict with libraries in implicit
directories:
runtime library [libz.so.1] in /usr/lib64 may be hidden by files in:
/home1/03023/rajeswar/lib
Some of these libraries may not be found correctly.
-- Generating done
-- Build files have been written to:
/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build
--------------------------------
make----------------------------------------------------------------------
login3$ make VERBOSE=1
/opt/apps/cmake/2.8.9/bin/cmake
-H/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp
-B/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build
--check-build-system CMakeFiles/Makefile.cmake 0
/opt/apps/cmake/2.8.9/bin/cmake -E cmake_progress_start
/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build/CMakeFiles
/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[1]: Entering directory
`/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build'
make -f CMakeFiles/demo_poisson.dir/build.make
CMakeFiles/demo_poisson.dir/depend
make[2]: Entering directory
`/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build'
cd /home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build &&
/opt/apps/cmake/2.8.9/bin/cmake -E cmake_depends "Unix Makefiles"
/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp
/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp
/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build
/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build
/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build/CMakeFiles/demo_poisson.dir/DependInfo.cmake
--color=
Dependee
"/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build/CMakeFiles/demo_poisson.dir/DependInfo.cmake"
is newer than depender
"/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build/CMakeFiles/demo_poisson.dir/depend.internal".
Dependee
"/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build/CMakeFiles/CMakeDirectoryInformation.cmake"
is newer than depender
"/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build/CMakeFiles/demo_poisson.dir/depend.internal".
Scanning dependencies of target demo_poisson
make[2]: Leaving directory
`/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build'
make -f CMakeFiles/demo_poisson.dir/build.make
CMakeFiles/demo_poisson.dir/build
make[2]: Entering directory
`/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build'
/opt/apps/cmake/2.8.9/bin/cmake -E cmake_progress_report
/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build/CMakeFiles
1
[100%] Building CXX object CMakeFiles/demo_poisson.dir/main.cpp.o
/usr/bin/c++ -DDOLFIN_VERSION=\"1.4.0\" -DBOOST_UBLAS_NDEBUG
-DDOLFIN_SIZE_T=8 -DHAS_CGAL -DHAS_ZLIB -DHAS_MPI -DHAS_OPENMP -DHAS_QT4
-DHAS_VTK -std=c++0x -Wno-deprecated -frounding-math
-fno-strict-aliasing -fopenmp -O2 -g -isystem
/home1/03023/rajeswar/include -isystem /usr/include/libxml2 -isystem
/opt/apps/intel14/mvapich2/2.0b/include -isystem
/home1/03023/rajeswar/include/eigen3 -isystem
/home1/03023/rajeswar/boost_1_55_0 -isystem
/home1/03023/rajeswar/include/vtk-6.1 -o
CMakeFiles/demo_poisson.dir/main.cpp.o -c
/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/main.cpp
Linking CXX executable demo_poisson
/opt/apps/cmake/2.8.9/bin/cmake -E cmake_link_script
CMakeFiles/demo_poisson.dir/link.txt --verbose=1
/usr/bin/c++ -std=c++0x -Wno-deprecated -frounding-math
-fno-strict-aliasing -fopenmp -O2 -g
CMakeFiles/demo_poisson.dir/main.cpp.o -o demo_poisson -rdynamic
/home1/03023/rajeswar/lib/libdolfin.so -lxml2
/home1/03023/rajeswar/boost_1_55_0/stage/lib/libboost_filesystem.so
/home1/03023/rajeswar/boost_1_55_0/stage/lib/libboost_program_options.so
/home1/03023/rajeswar/boost_1_55_0/stage/lib/libboost_system.so
/home1/03023/rajeswar/boost_1_55_0/stage/lib/libboost_thread.so
/home1/03023/rajeswar/boost_1_55_0/stage/lib/libboost_iostreams.so
/home1/03023/rajeswar/lib/libCGAL.so
/home1/03023/rajeswar/boost_1_55_0/stage/lib/libboost_thread.so
/home1/03023/rajeswar/boost_1_55_0/stage/lib/libboost_system.so
/home1/03023/rajeswar/lib/libgmp.so /home1/03023/rajeswar/lib/libmpfr.so
-lz /opt/apps/intel14/mvapich2/2.0b/lib/libmpichcxx.so
/opt/apps/intel14/mvapich2/2.0b/lib/libmpich.so
/opt/apps/intel14/mvapich2/2.0b/lib/libopa.so
/opt/apps/intel14/mvapich2/2.0b/lib/libmpl.so -lQtGui -lQtCore
/home1/03023/rajeswar/boost_1_55_0/stage/lib/libboost_iostreams.so
/home1/03023/rajeswar/lib/libCGAL.so /home1/03023/rajeswar/lib/libgmp.so
/home1/03023/rajeswar/lib/libmpfr.so -lz
/opt/apps/intel14/mvapich2/2.0b/lib/libmpichcxx.so
/opt/apps/intel14/mvapich2/2.0b/lib/libmpich.so
/opt/apps/intel14/mvapich2/2.0b/lib/libopa.so
/opt/apps/intel14/mvapich2/2.0b/lib/libmpl.so -lQtGui -lQtCore
-Wl,-rpath,/home1/03023/rajeswar/lib:/home1/03023/rajeswar/boost_1_55_0/stage/lib:/opt/apps/intel14/mvapich2/2.0b/lib
/usr/bin/ld: warning: libgmp.so.3, needed by
/home1/03023/rajeswar/lib/libmpfr.so, may conflict with libgmp.so.10
/usr/bin/ld: warning: libgmp.so.3, needed by
/home1/03023/rajeswar/lib/libmpfr.so, may conflict with libgmp.so.10
make[2]: Leaving directory
`/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build'
/opt/apps/cmake/2.8.9/bin/cmake -E cmake_progress_report
/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build/CMakeFiles
1
[100%] Built target demo_poisson
make[1]: Leaving directory
`/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build'
/opt/apps/cmake/2.8.9/bin/cmake -E cmake_progress_start
/home1/03023/rajeswar/share/dolfin/demo/documented/poisson/cpp/build/CMake
-------------------------------------------EXECUTION---------------------------------------
now when i execte i get following error
login3$ ./demo_poisson
Solving linear variational problem.
terminate called after throwing an instance of 'std::runtime_error'
what():
***
-------------------------------------------------------------------------
*** DOLFIN encountered an error. If you are not able to resolve this issue
*** using the information listed below, you can ask for help at
***
*** [email protected]
***
*** Remember to include the error message listed below and, if possible,
*** include a *minimal* running example to reproduce the error.
***
***
-------------------------------------------------------------------------
*** Error: Unable to factorize matrix with UMFPACK LU solver (symbolic).
*** Reason: UMFPACK has not been installed.
*** Where: This error was encountered inside UmfpackLUSolver.cpp.
*** Process: unknown
***
*** DOLFIN version: 1.4.0
*** Git changeset:
***
-------------------------------------------------------------------------
[login3.stampede.tacc.utexas.edu:mpi_rank_0][error_sighandler] Caught
error: Aborted (signal 6)
-------------------------------------------------------------------------------------------
for python iam stuck at same place
thanks....
*with regards..*
*M. Sai Rajeswar*
*M-tech Computer Technology*
*IIT Delhi----------------------------------Cogito Ergo Sum---------*
On Fri, Jun 27, 2014 at 5:39 PM, Johannes Ring <[email protected]> wrote:
> Yes, they look okay. What I don't understand is that the flag -std=c++0x
> is defined in DOLFIN_CXX_FLAGS in DOLFINConfig.cmake and DOLFIN_CXX_FLAGS
> is added to CMAKE_CXX_FLAGS in the CMakeLists.txt for the demo, but still
> the flag is not added when compiling the demo. Just to be sure, can you run
> the following commands in the C++ poisson demo directory?
>
> rm -rf build
> mkdir build
> cd build
> cmake ..
> make VERBOSE=1
>
> Then post the output from the make command here.
>
> Johannes
>
>
>
> On Tue, Jun 24, 2014 at 4:32 PM, Sai Rajeshwar <[email protected]> wrote:
>
>> are they fine.. should i reinstall dolfin .
>>
>> thanks..
>>
>> *with regards..*
>>
>> *M. Sai Rajeswar*
>> *M-tech Computer Technology*
>>
>>
>> *IIT Delhi----------------------------------Cogito Ergo Sum--------- *
>>
>>
>> On Tue, Jun 24, 2014 at 6:24 PM, Sai Rajeshwar <[email protected]>
>> wrote:
>>
>>>
>>> CMakeCache.txt
>>> <https://docs.google.com/file/d/0B02fGs-cS7CeMWhucGQ1Q3lJZlk/edit?usp=drive_web>
>>>
>>> DOLFINConfig.cmake
>>> <https://docs.google.com/file/d/0B02fGs-cS7CeNXZHQ3RoMGNPRm8/edit?usp=drive_web>
>>>
>>>
>>> *with regards..*
>>>
>>> *M. Sai Rajeswar*
>>> *M-tech Computer Technology*
>>>
>>>
>>> *IIT Delhi----------------------------------Cogito Ergo Sum---------*
>>>
>>>
>>> On Tue, Jun 24, 2014 at 6:01 PM, Johannes Ring <[email protected]>
>>> wrote:
>>>
>>>> On Tue, Jun 24, 2014 at 1:11 PM, Sai Rajeshwar <[email protected]>
>>>> wrote:
>>>> >
>>>> > login2$ make
>>>> > [100%] Building CXX object CMakeFiles/demo_poisson.dir/main.cpp.o
>>>> > In file included from
>>>> >
>>>> /usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../include/c++/4.4.7/type_traits:35,
>>>> > from /home1/03023
>>>> /rajeswar/include/dolfin/common/MPI.h:30,
>>>> > from
>>>> > /home1/03023/rajeswar/include/dolfin/common/dolfin_common.h:17,
>>>> > from /home1/03023/rajeswar/include/dolfin.h:10,
>>>> > from
>>>> > /home1/03023
>>>> /rajeswar/share/dolfin/demo/documented/poisson/cpp/main.cpp:34:
>>>> >
>>>> /usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../include/c++/4.4.7/c++0x_warning.h:31:2:
>>>> > error: #error This file requires compiler and library support for the
>>>> > upcoming ISO C++ standard, C++0x. This support is currently
>>>> experimental,
>>>> > and must be enabled with the -std=c++0x or -std=gnu++0x compiler
>>>> options.
>>>>
>>>> This is the same problem you had with the Python demo, that is, it
>>>> does not include the -std=c++0x flag. Can you attach the
>>>> CMakeCache.txt file in the demo build directory. Please also attach
>>>> DOLFINConfig.cmake (which should be installed in ~/share/dolfin/cmake/
>>>> in your case).
>>>>
>>>> Johannes
>>>>
>>>
>>>
>>
>
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