I had the same issue last week installing the new fenics 1.5 on a macosx 10.9 from the binary provided in the website. I think that there is an issue in the binary (it tries to link with a boost lib in a local path in the system where it was compiled)
The binary for fenics 1.4 works. Corrado Sent from a handheld device > Le 20/gen/2015 à 23:28, Adrian Butscher <[email protected]> a écrit : > > Hi, > > I’m running the lastest FEniCS on my Mac running osx 10.9.5. I installed > FEniCS using the .dmg provided on the FEniCS website and I’m using the FEniCS > shell provided by the FEniCS.app. I.e. I don’t think I’m doing anything > outside of the ordinary use-case. I’m having a bug that other users have > experienced in the past, and the solutions I’ve found online so far are not > clear to me (and seem a bit out of date). My apologies if I am re-asking a > question that has already been answered. > > The problem arises with the demo_poisson.py file though I think it will occur > whenever the Expression command is used. (In particular, it does NOT occur > when using the demo_cahn-hilliard.py file, as someone else on this forum > discovered.) Here’s the output from python: > > Calling DOLFIN just-in-time (JIT) compiler, this may take some time. > In instant.recompile: The module did not compile with command 'make > VERBOSE=1', see > '/Users/butscher/.instant/error/dolfin_compile_code_e71a4e0b9db4c7b3c4379cadd4a0fbc66cf1c990/compile.log' > Traceback (most recent call last): > File > "/Applications/FEniCS.app/Contents/Resources/share/dolfin/demo/documented/poisson/python/demo_poisson.py", > line 54, in <module> > f = Expression("10*exp(-(pow(x[0] - 0.5, 2) + pow(x[1] - 0.5, 2)) / 0.02)") > File > "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/dolfin/functions/expression.py", > line 602, in __new__ > mpi_comm=mpi_comm) > File > "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/dolfin/compilemodules/expressions.py", > line 217, in compile_expressions > mpi_comm=mpi_comm) > File > "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/dolfin/compilemodules/expressions.py", > line 145, in compile_expression_code > mpi_comm=mpi_comm) > File > "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/dolfin/compilemodules/jit.py", > line 64, in mpi_jit > return local_jit(*args, **kwargs) > File > "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/dolfin/compilemodules/compilemodule.py", > line 458, in compile_extension_module > **instant_kwargs) > File > "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/instant/build.py", > line 563, in build_module > recompile(modulename, module_path, new_compilation_checksum, build_system) > File > "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/instant/build.py", > line 165, in recompile > instant_error(msg % (cmd, compile_log_filename_dest)) > File > "/Applications/FEniCS.app/Contents/Resources/lib/python2.7/site-packages/instant/output.py", > line 85, in instant_error > raise RuntimeError(text) > RuntimeError: In instant.recompile: The module did not compile with command > 'make VERBOSE=1', see > '/Users/butscher/.instant/error/dolfin_compile_code_e71a4e0b9db4c7b3c4379cadd4a0fbc66cf1c990/compile.log’ > > If someone knows, please advise me on how to fix this problem. Many thanks. > > Adrian > _______________________________________________ > fenics-support mailing list > [email protected] > http://fenicsproject.org/mailman/listinfo/fenics-support _______________________________________________ fenics-support mailing list [email protected] http://fenicsproject.org/mailman/listinfo/fenics-support
