On Wed, Apr 29, 2015 at 2:47 PM, Xiaoping Qian <[email protected]> wrote: > Dear Johannes, > > Thank you for your quick response. > > What does it mean? Do I need to ask our administrator to install a new > version of gcc or what?
Yes, you will need gcc 4.9.2 or later. Johannes > Best regards, > Xiaoping. > > ________________________________________ > From: [email protected] <[email protected]> on behalf of Johannes > Ring <[email protected]> > Sent: Wednesday, April 29, 2015 7:43 AM > To: Xiaoping Qian > Cc: [email protected] > Subject: Re: [FEniCS-support] DOLFIN compiling error with fenics-install.sh > > On Wed, Apr 29, 2015 at 1:17 PM, Xiaoping Qian <[email protected]> wrote: >> Greetings, >> >> >> When I ran fenics-install.sh on my university cluster, I got the following >> DOLFIN compiling error. Please see the attached build.log. Also attached is >> my yaml file. >> >> >> >> ******************************** >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] 0xb1a35c vectorizable_store >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] >> /usr/gcc-4.9.0/source/gcc/tree-vect-stmts.c:5106 >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] 0xb1e6a2 >> vect_analyze_stmt(gimple_statement_base*, bool*, _slp_tree*) >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] >> /usr/gcc-4.9.0/source/gcc/tree-vect-stmts.c:7102 >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] 0xb2a296 >> vect_analyze_loop_operations >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] >> /usr/gcc-4.9.0/source/gcc/tree-vect-loop.c:1505 >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] 0xb2a296 vect_analyze_loop_2 >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] >> /usr/gcc-4.9.0/source/gcc/tree-vect-loop.c:1765 >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] 0xb2a296 >> vect_analyze_loop(loop*) >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] >> /usr/gcc-4.9.0/source/gcc/tree-vect-loop.c:1863 >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] 0xb3ca1b vectorize_loops() >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] >> /usr/gcc-4.9.0/source/gcc/tree-vectorizer.c:430 >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] Please submit a full bug >> report, >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] with preprocessed source if >> appropriate. >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] Please include the complete >> backtrace with any bug report. >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] See >> <http://gcc.gnu.org/bugs.html> for instructions. >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] gmake[2]: *** >> [dolfin/CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o] Error 1 >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] gmake[1]: *** >> [dolfin/CMakeFiles/dolfin.dir/all] Error 2 >> >> 2015/04/29 00:50:35 - INFO: [package:run_job] gmake: *** [all] Error 2 >> >> 2015/04/29 00:50:35 - ERROR: [package:run_job] Command '[u'/bin/bash', >> '_hashdist/build.sh']' returned non-zero exit status 2 >> >> 2015/04/29 00:50:35 - ERROR: [package:run_job] command failed (code=2); >> raising >> >> >> ********************************************** >> >> >> Any help is greatly appreciated. > > I see this in the build.log: > > 2015/04/29 00:50:35 - INFO: [package:run_job] > /home/xqian29/.hashdist/tmp/dolfin-kdjcfosiseqp/dolfin/ale/Poisson2D.h:251:15: > internal compiler error: in vectorizable_store, at > tree-vect-stmts.c:5106 > > It looks like this bug: > > https://gcc.gnu.org/bugzilla/show_bug.cgi?id=63563 > > Johannes _______________________________________________ fenics-support mailing list [email protected] http://fenicsproject.org/mailman/listinfo/fenics-support
