I suspect the need to get the prefix in the patch file is a relatively common problem. It would be useful to have this issue, and a possible solution, discussed in the packaging manual. I suggest the following text for the section 5.5 of Reference Manaul.
http://fink.sourceforge.net/doc/packaging/reference.php
"It may be necessary for the .patch file to include the fink prefix (e.g. /sw). However, /sw cannot be hard coded. One solution is to put a placeholder in the .patch file where the /sw would be, and use a patch script to patch the .patch file. Put
PatchScript: sed 's|@PREFIX@|%p|g' <%a/%n.patch | patch -p1
This will replace "@PREFIX@" in the .patch file with the user's prefix before the .patch file is used."
Kevin Horton
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