Hi Koen:
I just found that making a symbolic link to
/sw/include/gcrypt.h
which is provided by
libgcrypt: /sw/include/gcrypt.h
allowed it to compile. So it's probably just a case of replacing crypt.h
with gcrypt.h somewhere (or changing libgcrypt).
Bill
On Tue, 3 Apr 2007, Koen van der Drift wrote:
Hi Bill,
Thanks for the report. I am very busy, but may have some time later this
week or next week to look into this. If anyone else on the list has a clue
in the meantime, please let me know, Iand I can update the package
accordingly.
- Koen.
On Apr 3, 2007, at 2:03 PM, William Scott wrote:
>
> Hi Koen:
>
> Thanks for maintaining EMBOSS. I just tried installing on a new intel
> iMac and got the following error:
>
> ajjava.c:93:19: error: crypt.h: No such file or directory
>
> I've got i system-openssl-dev 0.9.7-6 Placeholder to
> force the use of the system SSL
>
> Thanks.
>
> Bill
>
>
>
> gcc -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\"
> -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"EMBOSS\"
> -DVERSION=\"4.1.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1
> -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1
> -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1
> -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DHAVE_DIRENT_H=1 -DSTDC_HEADERS=1 -
> DHAVE_UNISTD_H=1 -DGETPGRP_VOID=1 -DHAVE_STRFTIME=1 -DHAVE_UNISTD_H=1
> -DHAVE_FORK=1 -DHAVE_VFORK=1 -DHAVE_WORKING_VFORK=1 -DHAVE_WORKING_FORK=1
> -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 -DHAVE_LIBM=1 -DPLD_png=1 -I. -I.
> -DAJAX_FIXED_ROOT=
> \"/sw/src/fink.build/emboss-4.1.0-1/EMBOSS-4.1.0/emboss\" -DPREFIX=
> \"/sw\" -I../plplot -DPOSIX_MALLOC_THRESHOLD=10 -DAJ_MACOSXLF -
> Dstat64=stat -I/sw/include -DLENDIAN -I/System/Library/Frameworks/
> JavaVM.framework/Versions/1.4.2/Home -DHAVE_JAVA -I/System/Library/
> Frameworks/JavaVM.framework/Versions/1.4.2/Home/include -DNO_AUTH -O1 -c
> ajjava.c -fno-common -DPIC -o .libs/ajjava.o
> ajjava.c:93:19: error: crypt.h: No such file or directory
> ajjava.c: In function 'Java_org_emboss_jemboss_parser_Ajax_seqsetType':
> ajjava.c:335: warning: 'ajSeqsetLen' is deprecated (declared at
> ajseq.h:240)
> ajjava.c:337: warning: 'ajSeqsetTotweight' is deprecated (declared at
> ajseq.h:259)
> ajjava.c: In function 'Java_org_emboss_jemboss_parser_Ajax_fork':
> ajjava.c:1251: warning: passing argument 1 of 'ajSysStrtokR' discards
> qualifiers from pointer target type
> ajjava.c: In function 'make_array':
> ajjava.c:1525: warning: passing argument 1 of 'ajSysStrtokR' discards
> qualifiers from pointer target type
> make[1]: *** [ajjava.lo] Error 1
> make: *** [all-recursive] Error 1
> ### execution of make failed, exit code 2
> Removing runtime build-lock...
> Removing build-lock package...
> /sw/bin/dpkg-lockwait -r fink-buildlock-emboss-4.1.0-1
> (Reading database ... 144792 files and directories currently installed.)
> Removing fink-buildlock-emboss-4.1.0-1 ...
> Failed: phase compiling: emboss-4.1.0-1 failed
>
> Before reporting any errors, please run "fink selfupdate" and
> try again. If you continue to have issues, please check to see if the
> FAQ on fink's website solves the problem. If not, ask on the fink-users
> or fink-beginners mailing lists. As a last resort, you can try e-mailing
> the maintainer directly:
>
> Koen van der Drift <[EMAIL PROTECTED]>
>
> Note that many fink package maintainers do not have access to all
> possible
> hardware configurations, so you may have better luck on the mailing
> lists.
>
>
>
>
>
>
>
>
>
>
> William G. Scott
>
> Contact info:
> http://chemistry.ucsc.edu/~wgscott/
>
>
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