Hi Alexander,

Thanks for checking this out for me. 

If any one else on the list has any suggestions, please let me know.

Thanks! and all the best,

--Buz


On May 10, 2010, at 8:54 PM, Alexander Hansen wrote:

> On 5/10/10 5:10 PM, Alexander Hansen wrote:
>> On 5/10/10 4:42 PM, Buz Barstow wrote:
>>> Hi Alexander,
>>> 
>>> I've attached an error output below.
>>> 
>>> Thanks! and all the best,
>>> 
>>> --Buz
>>> 
>>> 
>>> 
>>> 
>>> 
>>> 
>>> 
>>> Python 2.5.4 (r254:67916, Apr 22 2010, 12:57:40) 
>>> Type "copyright", "credits" or "license" for more information.
>>> 
>>> IPython 0.8.2 -- An enhanced Interactive Python.
>>> ?         -> Introduction and overview of IPython's features.
>>> %quickref -> Quick reference.
>>> help      -> Python's own help system.
>>> object?   -> Details about 'object'. ?object also works, ?? prints more.
>>> 
>>> In [1]: import scipy
>>> 
>>> In [2]: from scipy.io.array_import import read_array
>>> ---------------------------------------------------------------------------
>>> ImportError                               Traceback (most recent call last)
>>> 
>>> /Users/buz/Documents/GTD/GTD Supporting Information/Work/Make an 
>>> O2-tolerant Hydrogenase/Sequence 2_12_2/Homology Model/<ipython console> in 
>>> <module>()
>>> 
>>> /sw/lib/python2.5/site-packages/scipy/io/__init__.py in <module>()
>>>     78 
>>>     79 # netCDF file support
>>> ---> 80 from netcdf import netcdf_file, netcdf_variable
>>>     81 
>>>     82 from recaster import sctype_attributes, Recaster
>>> 
>>> /sw/lib/python2.5/site-packages/scipy/io/netcdf.py in <module>()
>>>     16 
>>>     17 import struct
>>> ---> 18 import mmap
>>>     19 
>>>     20 from numpy import ndarray, zeros, array
>>> 
>>> ImportError: No module named mmap
>>> 
>>> In [3]: 
>>> 
>>> 
>>> 
>> 
>> Hmm...I couldn't reproduce this on my system (10.5.8 using the unstable
>> tree):
>> 
>> Fiona:~ hansen$ ipython2.5
>> Python 2.5.4 (r254:67916, Mar 17 2009, 03:17:29)
>> Type "copyright", "credits" or "license" for more information.
>> 
>> IPython 0.10 -- An enhanced Interactive Python.
>> ?         -> Introduction and overview of IPython's features.
>> %quickref -> Quick reference.
>> help      -> Python's own help system.
>> object?   -> Details about 'object'. ?object also works, ?? prints more.
>> 
>> In [1]: import scipy
>> 
>> In [2]: from scipy.io.array_import import read_array
>> 
>> In [3]:
>> 
>> 
>> I'll try 10.5 and 10.6 stable to see what happens.
> 
> I couldn't reproduce it on 10.5/stable, either.  I'm afraid I'm not
> going to have time to check 10.6 for a while; maybe someone else on the
> list can try this out.
> -- 
> Alexander Hansen
> Fink User Liaison


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