On 7/4/13 8:48 AM, Luigi Ernesto Zanotti wrote:
> On 04/07/2013 17:28, Alexander Hansen wrote:
>> On 7/4/13 8:23 AM, Luigi Ernesto Zanotti wrote:
>>> On 04/07/2013 16:39, Alexander Hansen wrote:
>>>> On 7/4/13 7:14 AM, Luigi Ernesto Zanotti wrote:
>>>>> On 04/07/2013 15:34, Alexander Hansen wrote:
>>>>>> On 7/4/13 3:33 AM, Luigi Ernesto Zanotti wrote:
>>>>>>>
>>>>>>> Owing to some troubles on my iMac, last week I decided to reinstall
>>>>>>> fink
>>>>>>> from scratch (fink-0-34-7).
>>>>>>> While installing root5 I got the following error:
>>>>>>> *
>>>>>>> /bin/mv /sw/src/fink.build/root-gts75-0.7.6-2/sw/bin/happrox
>>>>>>> /sw/src/fink.build/root-gts-bin-0.7.6-2/sw/bin/
>>>>>>> mv: rename /sw/src/fink.build/root-gts75-0.7.6-2/sw/bin/happrox to
>>>>>>> /sw/src/fink.build/root-gts-bin-0.7.6-2/sw/bin/happrox: No such
>>>>>>> file or
>>>>>>> directory
>>>>>>> ### execution of /bin/mv failed, exit code 1
>>>>>>> ### execution of /tmp/fink.fnOI2 failed, exit code 1
>>>>>>> Removing runtime build-lock...
>>>>>>> Removing build-lock package...
>>>>>>> /sw/bin/dpkg-lockwait -r fink-buildlock-gts75-0.7.6-2
>>>>>>> (Reading database ... 62604 files and directories currently
>>>>>>> installed.)
>>>>>>> Removing fink-buildlock-gts75-0.7.6-2 ...
>>>>>>> Failed: phase installing: gts-bin-0.7.6-2 failed
>>>>>>> *
>>>>>>> So I tried to install "gts75" separately, but the same error occurs.
>>>>>>> On the other hand, installation on an old Mac-i386 was
>>>>>>> successful; in
>>>>>>> both cases the package is "/sw/src/gts-0.7.6.tar.gz".
>>>>>>> Looking at installation log files it seems tha the routine
>>>>>>> "happrox",
>>>>>>> located in "/sw/src/gts-0.7.6.tar.gz", is never compiled on the
>>>>>>> iMac.
>>>>>>> Do you have suggestions to solve the problem?
>>>>>>> Thanks in advance and best regards,
>>>>>>>
>>>>>>>                               Luigi Zanotti
>>>>>>>
>>>>>>> Info:
>>>>>>> iMac Intel core 2 Duo, OS X 10.8.4, Xcode 4.6.3 with tools
>>>>>>> Distribution version: selfupdate-rsync Wed Jul  3 12:17:35 2013,
>>>>>>> 10.8,
>>>>>>> x86_64
>>>>>>> Trees: local/main stable/main
>>>>>>> Xcode.app: 4.6.3
>>>>>>> Xcode command-line tools: 4.6.0.0.1.1365549073
>>>>>>> Max. Fink build jobs:  1
>>>>>>>
>>>>>>> Macbook i386, OS X 10.6.8, Xcode 3.2.6
>>>>>>>
>>>>>>
>>>>>> I changed the subject because gts75 is what failed to build.
>>>>>>
>>>>>> As you thought, happrox never got compiled.  That's not enough
>>>>>> information to come up with a fix, though, since we really need to
>>>>>> see
>>>>>> _why_ this happened.
>>>>>>
>>>>>> I don't reproduce this error on 10.8 with Xcode 4.6.3. Let's start by
>>>>>> checking your output from an attempt to build gts75 and see if you
>>>>>> can
>>>>>> find another error earlier in the build.
>>>>>>
>>>>> By inspection of the redirected output of <fink install gts75> to
>>>>> file,
>>>>> with grep I could not find any mention of <happrox> except in the mv
>>>>> command that fails. The output is very big to send you a copy, so
>>>>> if you
>>>>> have to suggest any further inquiry you are welcome.
>>>>> Yours,
>>>>>                                                  Luigi Zanotti
>>>>>
>>>>> --
>>>>>
>>>>> Prof. Luigi E. Zanotti
>>>>> Physics Department "G. Occhialini"
>>>>> University of Milano-Bicocca & INFN
>>>>> Piazza della Scienza 3 - 20126 Milano - Italy
>>>>>
>>>>> Tel.: +39 02 6448 24613
>>>>> Cell.: +39 349 0997239
>>>>> E-mail:[email protected]
>>>>>
>>>>
>>>> I found the following item in your build configuration:
>>>>
>>>> configure: WARNING: libnetpbm not found. Some programs will not be
>>>> available.
>>>>
>>>> The gts75 package carries an explicit dependency on
>>>> libnetpbm10-shlibs, and so it _should_ find libnetbpm.  We can get
>>>> more information from
>>>> /sw/src/fink.build/gts75-0.7.6-2/gts-0.7.6/config.log .  Check in that
>>>> file at about line 814 where netpbm is being tested.  At that point I
>>>> have, for comparison:
>>>>
>>>> configure:20836: checking for pgm_init in -lnetpbm
>>>> configure:20866: gcc -o conftest -g -O2 -Wall
>>>> -Werror-implicit-function-declaration -Wstrict-prototypes
>>>> -Wmissing-prototypes -Wmissing-declarations -I/sw/include -L/sw/lib
>>>> conftest.c -lnetpbm   >&5
>>>> configure:20872: $? = 0
>>>> configure:20875: test -z              || test ! -s conftest.err
>>>> configure:20878: $? = 0
>>>> configure:20881: test -s conftest
>>>> configure:20884: $? = 0
>>>> configure:20897: result: yes
>>>>
>>>> Hopefully there will be an error message here which will help us
>>>> figure out what exactly is going on.
>>> I find at line 812 and after:
>>>
>>> configure:20825: result: yes
>>> configure:20836: checking for pgm_init in -lnetpbm
>>> configure:20866: gcc -o conftest -g -O2 -Wall
>>> -Werror-implicit-function-declaration -Wstrict-prototypes
>>> -Wmissing-prototypes -Wmissing-declarations -I/sw/include -L/sw/lib
>>> conftest.c -lnetpbm   >&5
>>> ld: library not found for -lnetpbm
>>> clang: error: linker command failed with exit code 1 (use -v to see
>>> invocation)
>>> configure:20872: $? = 1
>>> configure: failed program was:
>>> | /* confdefs.h.  */
>>> |
>>>
>>> so here something is wrong! Now a list from fink:
>>>
>>> iMac-home-17:20:~> fink list netpbm
>>> Information about 7608 packages read in 3 seconds.
>>>       netpbm               9.25-16         Graphics manipulation
>>> programs and libraries
>>> (i)  netpbm-bin           10.47.44-2      Graphics manipulation programs
>>> and libraries
>>>   i   netpbm-shlibs        9.25-16         Graphics manipulation
>>> programs and libraries
>>>   i   netpbm10             10.47.44-2      Graphics manipulation
>>> programs and libraries
>>>   i   netpbm10-shlibs      10.47.44-2      Graphics manipulation
>>> programs and libraries
>>>
>>> What to do?
>>>                                                      Luigi Zanotti
>>>
>>> --
>>>
>>> Prof. Luigi E. Zanotti
>>> Physics Department "G. Occhialini"
>>> University of Milano-Bicocca & INFN
>>> Piazza della Scienza 3 - 20126 Milano - Italy
>>>
>>> Tel.: +39 02 6448 24613
>>> Cell.: +39 349 0997239
>>> E-mail:[email protected]
>>>
>>>
>>
>> First, see if 'fink update netpbm-bin' resolves the issue--when the
>> different packages in a family have different versions this can cause
>> problems.
>>
> After -fink update netpbm-bin -  I have:
>
> iMac-home-17:39:~> fink list netpbm
> Information about 7608 packages read in 1 seconds.
>       netpbm               9.25-16         Graphics manipulation
> programs and libraries
>   i   netpbm-bin           10.47.44-2      Graphics manipulation
> programs and libraries
>   i   netpbm-shlibs        9.25-16         Graphics manipulation
> programs and libraries
>   i   netpbm10             10.47.44-2      Graphics manipulation
> programs and libraries
>   i   netpbm10-shlibs      10.47.44-2      Graphics manipulation
> programs and libraries
>
> but gts75 fails as before (same error in config.log).
>
>                                      Luigi Zanotti
>
> --
>
> Prof. Luigi E. Zanotti
> Physics Department "G. Occhialini"
> University of Milano-Bicocca & INFN
> Piazza della Scienza 3 - 20126 Milano - Italy
>
> Tel.: +39 02 6448 24613
> Cell.: +39 349 0997239
> E-mail:[email protected]
>

Ok, I thought we should start with the simplest option first.

Let's check for the presence of the libraries.  What do you get from:

ls -l /sw/lib/libnetpbm*

-- 
Alexander Hansen, Ph.D.
Fink User Liaison
My package updates: http://finkakh.wordpress.com/

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