Dear Kurt and Fink Users, I followed Alex’s suggestion and used pre-build binaries (after adding deb http://bindist.finkproject.org/10.10 stable main to my search tree.)
Everything (including HDF4, gfortran) works fine. Back compiling again in MacOS 10.10... Gratefully, Mike > On Nov 6, 2014, at 12:05 PM, Kurt Schwehr <kurtschw...@yahoo.com> wrote: > > Hdf4 is a serious PITA. I have patches available for the HDFgroup to grab > from here https://github.com/schwehr/hdf4. However, the response I got from > them was that they don't have eng time available to take patches on hdf4 > > Sent from my iPhone > >> On Nov 5, 2014, at 3:16 PM, Michael Mauel <m...@columbia.edu> wrote: >> >> Dear Alex and Kurt, >> >> Suggested temporary fix to build HDF library failed because of a failure >> with a dependent package >> >> locale-gettext-pm5182 >> >> I put the error message below, and the full install script as a text >> attachment. >> >> Grateful for all of your work w FINK >> >> Mike >> >> —— Error building HDF in MacOS 10.10 (using A Hansen’s gcc48—>gcc49 >> redefine.) ————— >> >> Setting runtime build-lock... >> dpkg-deb -b >> /sw/src/fink.build/root-fink-buildlock-locale-gettext-pm5182-1.05-3 >> /sw/src/fink.build >> dpkg-deb: building package `fink-buildlock-locale-gettext-pm5182-1.05-3' in >> `/sw/src/fink.build/fink-buildlock-locale-gettext-pm5182-1.05-3_2014.11.05-18.08.28_darwin-x86_64.deb'. >> Installing build-lock package... >> /sw/bin/dpkg-lockwait -i >> /sw/src/fink.build/fink-buildlock-locale-gettext-pm5182-1.05-3_2014.11.05-18.08.28_darwin-x86_64.deb >> Selecting previously deselected package >> fink-buildlock-locale-gettext-pm5182-1.05-3. >> (Reading database ... 6823 files and directories currently installed.) >> Unpacking fink-buildlock-locale-gettext-pm5182-1.05-3 (from >> .../fink-buildlock-locale-gettext-pm5182-1.05-3_2014.11.05-18.08.28_darwin-x86_64.deb) >> ... >> Setting up fink-buildlock-locale-gettext-pm5182-1.05-3 (2014.11.05-18.08.28) >> ... >> >> sudo -u fink-bld [ENV] sh -c /tmp/fink.Gfcye >> env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xf >> /sw/src/locale-gettext-pm-1.05.tar.gz >> sudo -u fink-bld [ENV] sh -c /tmp/fink.khHJU >> [ -r >> /sw/fink/dists/stable/main/finkinfo/libs/perlmods/locale-gettext-pm.patch ] >> sudo -u fink-bld [ENV] sh -c /tmp/fink.tTnw7 >> patch -p1 < >> /sw/fink/dists/stable/main/finkinfo/libs/perlmods/locale-gettext-pm.patch >> patching file Makefile.PL >> sudo -u fink-bld [ENV] sh -c /tmp/fink.pVxWh >> if [ -e /usr/local/lib/libintl.a -o -e /usr/local/lib/libintl.dylib ]; then >> echo "locale-gettext-pm5182 often builds incorrectly if >> /usr/local/lib/libintl.*"; echo "exists. Please move aside /usr/local and >> try again."; exit 1; fi >> locale-gettext-pm5182 often builds incorrectly if /usr/local/lib/libintl.* >> exists. Please move aside /usr/local and try again. >> ### execution of if failed, exit code 1 >> ### execution of /tmp/fink.pVxWh failed, exit code 1 >> Removing runtime build-lock... >> Removing build-lock package... >> /sw/bin/dpkg-lockwait -r fink-buildlock-locale-gettext-pm5182-1.05-3 >> (Reading database ... 6824 files and directories currently installed.) >> Removing fink-buildlock-locale-gettext-pm5182-1.05-3 ... >> Updating the list of locally available binary packages. >> Scanning dists/stable/main/binary-darwin-x86_64 >> New package: >> dists/stable/main/binary-darwin-x86_64/graphics/libjpeg-bin_6b-19_darwin-x86_64.deb >> New package: >> dists/stable/main/binary-darwin-x86_64/graphics/libjpeg-shlibs_6b-19_darwin-x86_64.deb >> New package: >> dists/stable/main/binary-darwin-x86_64/graphics/libjpeg_6b-19_darwin-x86_64.deb >> Failed: phase compiling: locale-gettext-pm5182-1.05-3 failed >> >> Before reporting any errors, please run "fink selfupdate" and try again. >> >> Full build script: >> >> <install hdf errors.txt> >> >>> On Nov 5, 2014, at 5:28 PM, Alexander Hansen <alexanderk.han...@gmail.com> >>> wrote: >>> >>> Forwarding this onto the list, too. >>> >>>> On Nov 5, 2014, at 10:35 AM, Michael Mauel <m...@columbia.edu> wrote: >>>> >>>> Dear Kurt, >>>> >>>> I’m writing you because I believe that you’re the maintainer of HDF in >>>> Fink. >>>> >>>> Fink searches for gcc48, but gcc49 is used for MacOS 10.10 >>>> >>>> I still use HDF for some older code, and it would be great to get it >>>> running again in v10.10 >>>> >>>> Sincerely, >>>> >>>> Mike Mauel >>>> >>>> mem4:~ mauel$ fink install hdf >>>> Information about 10061 packages read in 1 seconds. >>>> Can't resolve dependency "gcc48" for package "hdf-4.2r4-1003" (no matching >>>> packages/versions found) >>>> Exiting with failure. >>>> >>>> mem4:~ mauel$ gcc --version >>>> Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr >>>> --with-gxx-include-dir=/usr/include/c++/4.2.1 >>>> Apple LLVM version 6.0 (clang-600.0.54) (based on LLVM 3.5svn) >>>> Target: x86_64-apple-darwin14.0.0 >>>> Thread model: posix >>>> >>>> mem4:~ mauel$ fink list gcc >>>> Information about 10061 packages read in 0 seconds. >>>> avr-gcc 4.8.3-1 GNU GCC for ATMEL AVR micro controllers >>>> broken-gcc 3.3-1 [virtual package representing a broken >>>> gcc compiler] >>>> gcc4.2 4.2-0 [virtual package representing the gcc >>>> 4.2 compiler] >>>> gcc49 4.9.2-1000 GNU Compiler Collection Version 4.9 >>>> gcc49-compiler 4.9.2-1000 Compiler Binaries for gcc49 >>>> gcc49-shlibs 4.9.2-1000 Shared libraries for gcc4 >>>> liboctave364-gcc4 [virtual package] >>>> liboctave364-gcc4 [virtual package] >>>> liboctave382-gcc4 [virtual package] >>>> liboctave382-gcc4 [virtual package] >>>> llvm-gcc42 2336.11-7 Apple gcc compiler frontend for llvm >>>> llvm-gcc42-shlibs 2336.11-7 Shared libraries for llvm-gcc42 >>>> m681x-gcc 3.3.6-3 For Motorola 68hc11/12 micro controllers >>>> msp430-gcc 4.6.3-2012040 GNU GCC for for Texas Instruments >>>> MSP430 MCU >>>> mem4:~ mauel$ >>>> >>>> >>>> . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . >>>> Department of Applied Physics and Applied Mathematics >>>> Columbia University, New York, NY 10027 U.S.A. >>>> Office: (212) 854-4455 FAX: (212) 854-8257 Voice: (646) 374-8531 >>>> <mailto:ma...@columbia.edu> <http://www.columbia.edu/~mem4/> >>>> . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . >>> >>> >>> Yeah, we like not to have to carry older library versions forward for new >>> OS X and encourage maintainers to update their packages to utilize newer >>> ones instead. >>> >>> If you want to attempt a quick local update to HDF yourself, it’s a pretty >>> straightforward process (no guarantees, though): >>> >>> 1) cp /sw/fink/dists/stable/main/finkinfo/sci/hdf.* >>> /sw/fink/10.7/local/main/finkinfo >>> (you may need to use ‘sudo’, depending on the permissions of the >>> directories). The local tree is preferred. >>> >>> 2) Edit /sw/fink/10.7/local/main/finkinfo in your favorite text editor >>> and change all occurrences of ‘gcc48' to ‘gcc49'. I recommend changing the >>> Revision to something fractional, like 1003.1, so that when Kurt releases >>> the official update at Revision: 1004 you’ll be able to install that >>> automatically. >>> >>> 3) fink install hdf >>> >>> If 3) doesn’t work then post back with the error and we can try to debug >>> things. >>> -- >>> Alexander Hansen, Ph.D. >>> Fink User Liaison ------------------------------------------------------------------------------ _______________________________________________ Fink-users mailing list Fink-users@lists.sourceforge.net List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users
