David,
I've also just updated the rnmr-r.info to build the latest 1.1.8
release. If you do a 'fink selfupdate' and 'fink update-all', you'll pick
it up.
Jack
On Mon, Nov 17, 2014 at 1:47 PM, DavidPeyton_psu <peyt...@pdx.edu> wrote:
> Jack,
>
> interesting…
>
> Rebooting, then
> fink install rnmr-r31 failed as before.
>
> However, I then ran an X11-using application (molmol or ccpnmr; I don’t
> remember which I called for, actually), but then fink install rnmr-r31
> worked (!).
>
> nettlesome indeed.
>
> Thanks!
>
> d
> --
> Best!
> dhp
> --
> David H. Peyton, Ph.D.
> Room 323B SB-1 (office behind lab)
> Professor of Chemistry
> Portland State University
> Portland, OR 97207-0751
> peyt...@pdx.edu
> 503 725-3875
>
> On Nov 17, 2014, at 10:30 AM, Jack Howarth <howarth.at.f...@gmail.com>
> wrote:
>
> David,
> In languages/swi-prolog.info, I see...
>
> X and the tests seem nettlesome. See:
>
>
> http://sourceforge.net/p/fink/package-submissions/4344/?limit=10&page=1#ee05
> "For the xvfb-run failure, danielj on #fink just discovered that you
> have to first run X11 at least once after a reboot for xvfb-run to
> work. Both he and I were seeing a similar Xvfb failed to start error,
> and just starting X11 once made it work (X11.app doesn't have to be
> actually running when the tests run; it just has to have run at least
> once)."
>
> Which seems to be the same error that you are seeing. I would try rebooting
> and then rebuilding rnmr-r31 afterwards.
> Jack
>
> On Mon, Nov 17, 2014 at 1:05 PM, DavidPeyton_psu <peyt...@pdx.edu> wrote:
>
>> Yes; I can run a number of X11 applications, including ccpnmr, etc.
>> --
>> Best!
>> dhp
>> --
>> David H. Peyton, Ph.D.
>> Room 323B SB-1 (office behind lab)
>> Professor of Chemistry
>> Portland State University
>> Portland, OR 97207-0751
>> peyt...@pdx.edu
>> 503 725-3875
>>
>> On Nov 17, 2014, at 10:04 AM, Jack Howarth <howarth.at.f...@gmail.com>
>> wrote:
>>
>> David,
>> Have you already installed Xquartz 2.7.7 from
>> http://xquartz.macosforge.org and launched the Xquartz application at
>> least once before building rnmr-r31?
>> Jack
>>
>> On Mon, Nov 17, 2014 at 12:32 PM, DavidPeyton_psu <peyt...@pdx.edu>
>> wrote:
>>
>>> Compile error in Yosemite during installation attempt of rnmr-r31:
>>>
>>> fink install rnmr-r31
>>> …
>>> rNMR/R/rNMR.r
>>> sudo -u fink-bld [ENV] sh -c /tmp/fink.B3S_y
>>> /tmp/fink.VJSgr
>>> #!/bin/sh -ev
>>> # create byte-compiled R extension binary package from re-archived
>>> source tarball
>>> cd ..
>>> mkdir pkg
>>> `which xvfb-run`
>>> /Volumes/external_HD/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/bin/R
>>> CMD INSTALL -l pkg --byte-compile --build rNMR_1.1.7.tar.gz
>>> which xvfb-run
>>> Xvfb failed to start
>>> ### execution of /tmp/fink.VJSgr failed, exit code 1
>>> ### execution of /tmp/fink.B3S_y failed, exit code 1
>>> Removing runtime build-lock...
>>> Removing build-lock package...
>>> /Volumes/external_HD/sw/bin/dpkg-lockwait -r
>>> fink-buildlock-rnmr-r31-1.1.7-3
>>> (Reading database ... 61092 files and directories currently installed.)
>>> Removing fink-buildlock-rnmr-r31-1.1.7-3 ...
>>> Failed: phase compiling: rnmr-r31-1.1.7-3 failed
>>>
>>>
>>> Thanks!
>>> David
>>
>>
>>
>>
>
>
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