Jack,
interesting…
Rebooting, then
fink install rnmr-r31 failed as before.
However, I then ran an X11-using application (molmol or ccpnmr; I don’t
remember which I called for, actually), but then fink install rnmr-r31 worked
(!).
nettlesome indeed.
Thanks!
d
--
Best!
dhp
--
David H. Peyton, Ph.D.
Room 323B SB-1 (office behind lab)
Professor of Chemistry
Portland State University
Portland, OR 97207-0751
peyt...@pdx.edu
503 725-3875
> On Nov 17, 2014, at 10:30 AM, Jack Howarth <howarth.at.f...@gmail.com> wrote:
>
> David,
> In languages/swi-prolog.info <http://swi-prolog.info/>, I see...
>
> X and the tests seem nettlesome. See:
>
> http://sourceforge.net/p/fink/package-submissions/4344/?limit=10&page=1#ee05
> <http://sourceforge.net/p/fink/package-submissions/4344/?limit=10&page=1#ee05>
> "For the xvfb-run failure, danielj on #fink just discovered that you
> have to first run X11 at least once after a reboot for xvfb-run to
> work. Both he and I were seeing a similar Xvfb failed to start error,
> and just starting X11 once made it work (X11.app doesn't have to be
> actually running when the tests run; it just has to have run at least
> once)."
>
> Which seems to be the same error that you are seeing. I would try rebooting
> and then rebuilding rnmr-r31 afterwards.
> Jack
>
> On Mon, Nov 17, 2014 at 1:05 PM, DavidPeyton_psu <peyt...@pdx.edu
> <mailto:peyt...@pdx.edu>> wrote:
> Yes; I can run a number of X11 applications, including ccpnmr, etc.
> --
> Best!
> dhp
> --
> David H. Peyton, Ph.D.
> Room 323B SB-1 (office behind lab)
> Professor of Chemistry
> Portland State University
> Portland, OR 97207-0751
> peyt...@pdx.edu <mailto:peyt...@pdx.edu>
> 503 725-3875 <tel:503%20725-3875>
>
>> On Nov 17, 2014, at 10:04 AM, Jack Howarth <howarth.at.f...@gmail.com
>> <mailto:howarth.at.f...@gmail.com>> wrote:
>>
>> David,
>> Have you already installed Xquartz 2.7.7 from
>> http://xquartz.macosforge.org <http://xquartz.macosforge.org/> and launched
>> the Xquartz application at least once before building rnmr-r31?
>> Jack
>>
>> On Mon, Nov 17, 2014 at 12:32 PM, DavidPeyton_psu <peyt...@pdx.edu
>> <mailto:peyt...@pdx.edu>> wrote:
>> Compile error in Yosemite during installation attempt of rnmr-r31:
>>
>> fink install rnmr-r31
>> …
>> rNMR/R/rNMR.r
>> sudo -u fink-bld [ENV] sh -c /tmp/fink.B3S_y
>> /tmp/fink.VJSgr
>> #!/bin/sh -ev
>> # create byte-compiled R extension binary package from re-archived source
>> tarball
>> cd ..
>> mkdir pkg
>> `which xvfb-run`
>> /Volumes/external_HD/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/bin/R
>> CMD INSTALL -l pkg --byte-compile --build rNMR_1.1.7.tar.gz
>> which xvfb-run
>> Xvfb failed to start
>> ### execution of /tmp/fink.VJSgr failed, exit code 1
>> ### execution of /tmp/fink.B3S_y failed, exit code 1
>> Removing runtime build-lock...
>> Removing build-lock package...
>> /Volumes/external_HD/sw/bin/dpkg-lockwait -r fink-buildlock-rnmr-r31-1.1.7-3
>> (Reading database ... 61092 files and directories currently installed.)
>> Removing fink-buildlock-rnmr-r31-1.1.7-3 ...
>> Failed: phase compiling: rnmr-r31-1.1.7-3 failed
>>
>>
>> Thanks!
>> David
>>
>
>
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