Title: Recon-all followup
Following Yuan-Fen Kuo’s suggestion, I added a # at line 275 in recon-all.  Recon-all –stage1 now proceeds until it crashes with the following:

Intensity Normalization Tue Aug 30 12:47:03 CDT 2005
/Users/Shared/freesurfer/subjects/00139/mri
mri_normalize orig.mgz T1.mgz
reading from orig.mgz...
normalizing image...
talairach transform
 1.131  -0.045  -0.066   0.052;
 0.052   1.009   0.210  -10.266;
 0.056  -0.234   1.111  -12.367;
 0.000   0.000   0.000   1.000;
INFO: Modifying talairach volume c_(r,a,s) based on average_305
building Voronoi diagram...
performing soap bubble smoothing...
3d normalization pass 1 of 2
Bus error
ERROR: mri_normalize exited with non-zero status
recon-all exited with errors at Tue Aug 30 12:48:33 CDT 2005

Any suggestions on proceeding?


------------------
Clifford Smith, PhD
Assistant Professor of Behavioral Sciences
Rush University Medical Center
312.942.2893

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