Hi Shahab,

this should be in the wiki too. If you have your SUBJECTS_DIR set properly, you can display the segmentation via:

tkmedit $subject norm.mgz -segmentation mri/aseg.mgz 
$FREESURFER_HOME/FreeSurferColorLUT.txt

cheers,
Bruce

On Sun, 19 Mar 2006, Shahabuddin Ansari wrote:

Hello,

Thanks for answering my previous querry. I have
successfully segmented the subcortical regions of the
brain. Now, my next simple question is how to display
each segmented object separately? I think it is to do
with masking, but not sure how to apply that in 3D.

Thanks
Shahab

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