it should not be taking that long. It must be hanging somewhere. Try
re-running it with --debug as the first option. It will print out a
bunch of stuff to the screen, but you should be able to see where it
hangs (if it does).
doug
Furlong, Carolyn wrote:
Thanks Doug,
I have tried your suggestion and set the command make_average_subject
running again. I has been going for several hours but there is no
visible change/activity on the console, is this unusual?.
Also, there are only 13 subjects, how long would you expect this
process to take per subject?
Best wishes
Carolyn
------------------------------------------------------------------------
From: Doug Greve [mailto:[EMAIL PROTECTED]
Sent: Wed 5/9/2007 6:21 PM
To: Furlong, Carolyn
Cc: Freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Make_average_subject error
you may be using a version that does not have this option. Try using these
doug
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/make_average_subject
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/make_average_surface
Furlong, Carolyn wrote:
Hi all,
I tried running it again with --no-symlink but this error came up
ERROR: Flag --no-symlink unrecognized.
any advice?
Best wishes
Carolyn
------------------------------------------------------------------------
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--
Douglas N. Greve, Ph.D.
MGH-NMR Center
[EMAIL PROTECTED]
Phone Number: 617-724-2358
Fax: 617-726-7422
In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
------------------------------------------------------------------------
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
--
Douglas N. Greve, Ph.D.
MGH-NMR Center
[EMAIL PROTECTED]
Phone Number: 617-724-2358
Fax: 617-726-7422
In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
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