Hi Emily,

is it a volume or surface functional map? If volume, I think it should be pretty straightforward to sample it onto the surface with mri_vol2surf then go from there. There is probably a way to do this in SUMA also.

cheers,
Bruce
On Wed, 9 Jan 2008, Emily Trittschuh wrote:

Dear Group,

Back in April, Anil Roy posted a question about methods to generate a gray
matter mask that can be fed into AFNI . . . I'm wondering if the opposite
can be done? Can a functional mask made in AFNI be fed easily into
Freesurfer?  Currently this mask is saved as a NIFTI dataset.

Thank you.
Emily

Emily Trittschuh, PhD
Neuropsychology Post-doctoral Fellow
Cognitive Neurology and Alzheimer's Disease Center
Northwestern University Feinberg School of Medicine
320 E. Superior Street, Searle 11-579
Chicago, IL 60611
phone 312/503-1155
fax 312/908-8789


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