is there any reason you can't just start with the dicom? You can check the orientation on the converted files to see if it's wrong - that's usually what happens. How did you convert from PAR REC?

cheers,
Bruce


On Fri, 26 Jun 2009, sameer kumar wrote:

Hi guys,
I have the raw PAR REC and DICOM files from the scanner. I converted the PAR
REC files to mgz and ran recon-all but it exited with errors. But when I
converted the DICOM files into mgz and ran recon-all, it was running fine.
Can anyone tell me why this is happening.

Regards,
Sameer

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

Reply via email to