All, I'm setting up a processing stream for a sizable dataset and I'd like to use .tcl scripts to save out images for some preliminary quality control checks. It was my intention to output images of the the curvature and structural parcelation overlaid on the inflated surface (6 views for each hemi) and the lh/rh.white and aseg.mgz segmentation overlaid on the volume (a midline coronal, sagital, and axial slice). The idea would be that then we could go through and quickly check which subjects may need manual intervention.
I wanted to double check that the images I am saving out are consistent with the checks that other folks are doing and I'd love to get some feedback on what else I should look save. Thanks, Avram -- Avram Holmes PhD Postdoctoral fellow Buckner Lab Department of Psychology and Center for Brain Science, Harvard University Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
