Hi, I had a question in reference to the following message (posted by Nick 
Schmansky):


"1. in freesurfer v5, there are now multiple fsaverage subjects with
varying number of vertices.  fsaverage6 has about 40,000 vertices per
hemi, so you can just include the flag:

--target fsaverage6

after the -qcache flag, and it will use that as the target instead of
fsaverage (producing files like 'rh.thickness.fsaverage6.mgh', which
will have 40K thickness samples)."

As I was also interested in trying this out, I ran the following in v5:

recon-all -qcache -target fsaverage6 -s $subject

However, recon-all failed to find fsaverage6, and I also couldn't manually find 
it in $FREESURFER_HOME. If this is included in the current distribution, where 
do I need to look?

Thanks,

Aaron

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

Reply via email to