This is very neat. Thank you everyone for your responses! Vy T.U. Dinh Research Assistant, Neurological Sciences Rush University Medical Center Phone: (312) 563-3853 Fax: (312) 563-4660 Email: [email protected]
________________________________________ From: Allison Player [[email protected]] Sent: Thursday, October 13, 2011 2:10 PM To: Douglas N Greve Cc: Vy Dinh; [email protected] Subject: Re: [Freesurfer] Automatic corrections log/diary and questions about Tkmedit color options I believe if you go to the View menu you can select "Edited voxels" which will show what you edited in that session in blue. If you run: recon-all -show-edits -s subjid this will show you white matter and brainmask edits you have made I belive. We don't print a log of the manual correections but that is an interesting idea. Allison On Thu, 13 Oct 2011, Douglas N Greve wrote: > I don't know about the rest, but you can change the cursor and surface > colors with View->Configure > > Vy Dinh wrote: >> Dear Experts, >> >> Does Freesurfer print an automatic log or diary of the manual >> corrections (to a brainmask) made in Tkmedit? >> >> Also, is there any way that I can change the color of the edited >> voxels? It would be great to view the edited voxels as anything but >> black and white (eg dark blue and a bright yellow respectively) when >> reviewing the corrections. Is it possible to change the color of the >> crosshair or the surface boundaries? Because the crosshair and the >> pial surface boundary are both red, it is quite difficult to locate >> the crosshair when changing the views. I am also concerned that the >> red/green lines may be an issue for colorblind users. >> >> Best, >> >> Vy T.U. Dinh >> Research Assistant, Neurological Sciences >> Rush University Medical Center >> Phone: (312) 563-3853 >> Fax: (312) 563-4660 >> Email: [email protected] <mailto:[email protected]> >> ------------------------------------------------------------------------ >> >> _______________________________________________ >> Freesurfer mailing list >> [email protected] >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. _______________________________________________ Freesurfer mailing list [email protected] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
