eek, no, we definitely don't see this. Can you upload the subject? Bruce On Tue, 18 Oct 2011, Pernille Iversen wrote:
> Hi > After running several subjects (using trio siemens dicomfiles) with recon-all > -all -nowmsa, we have observed an apparent shift of approximately one > voxel to the left of the pial surface as compared to the brainmask.mgz in the > TkMedit coronal view. This was observed in all of our subjects. Do you > have any explanation for this - are there any corrections we need to do to > avoid this? > > Thanks, > Pernille > > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.