1.5GB is probably not enough. typically we recommend that recon-all have at least 3GB available to it, which can be very hard to do on a virtual machine (since windows takes 1GB, the vm linux takes another 1GB, which leaves 2GB for processes). i would setup your vm to use the maximum memory allowed (just dont run stuff in windows at the same time).
n. On Mon, 2011-12-05 at 15:01 +0100, Lorenzo Busti wrote: > Hi everyone > I got this error while running one of my subjects > > > mri_ca_register: GCAMwrite(transforms/talairach.m3z) failed > > ERROR: mri_ca_register with non-zero status 252 > > but continuing despite the error > > #-------------------------------------- > > #@# CA Reg Inv Thu Nov 24 05:15:42 EST 2011 > > /home/virtualuser/freesurfer/subjects/Petrollini2/mri > > > > mri_ca_register -invert-and-save transforms/talairach.m3z > > > > Loading, Inverting, Saving, Exiting ... > > Reading transforms/talairach.m3z > > ERROR: cannot find or read transforms/talairach.m3z > > ERROR: mri_ca_register with non-zero status 0 > > Linux FreeSurfer 2.6.28-11-generic #42-Ubuntu SMP Fri Apr 17 01:57:59 > UTC 2009 i686 GNU/Linux > > > > recon-all -s Petrollini2 exited with ERRORS at Thu Nov 24 05:15:43 EST > 2011 > > > > To report a problem, > see http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > > > I'm working with a virtual machine on a 32 bit computer with 4GB of > RAM(2-core Intel processor 2.00 GHz). I raised the ram dedicated to > the virtual machine to 1,5 GB: this is the max value permitted before > the selecting bar of the virtual box changes from green to red (is it > sufficent?) > > I have free space for data. > > Can you help me in solving this problem? > > Thanks > > Lorenzo Busti > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
