Hello, I was hoping someone may know the answer to this. I am using freesurfer version 5.1.
Using this command unpacksdcmdir -src DICOMS/"$1"_dicom -targ $1 -fsfast -scanonly $1/scan_"$1".txt where scan_name.txt lists the scan names used in the protocol and $1 is the subject's ID. I keep getting this error for my diffusion images: --------------------------------------------------------- Run 9 ----------------------------------------- Thu Dec 15 08:23:55 EST 2011 9 ep2d_diff_mddw_20_p2-MOD MGZ 009.mgz INFO: this run has an error, but trying anyway Files In Run: --------------- 04945195 ----------------------------- ERROR: reading DICOMS/TBI_B41_dicom//04945195 tag 28 30 I have two different sets of protocols and this is only happening for subjects with this protocol- exactly the same error with the same dicom (TENSOR dicom). However, when using another protocol I do not receive this error- and I have two different sets of scan names for them respectively. Any idea what this can be and how to fix- or if this will seriously affect processing if I just went on to manually convert the dti image? Thanks, Danielle Ph.D. Program in Behavioral Neuroscience Boston University School of Medicine L-815 72 E. Concord St Boston, MA 02118 VA Boston Healthcare System Jamaica Plain Memory Disorders Research Center 150 South Huntington Ave D11-111 Boston, MA 02130 OFFICE:(857) 364-2853 _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
