Hi Julia it's really hard to tell from just this image. If the problem is the skull strip removing voxels you can use the "clone" tool to paint them back in from another volume like the T1.mgz. Are you sure it's not dura or pial vessels? Where in the brain do you mean?
cheers Bruce On Thu, 22 Mar 2012, Richter, Julia wrote: > Sorry, this time with attachment :). > > Hi freesurfer experts, > > I am trying to correct the pial surfaces of my data. I was able to remove > voxels with the right button of my mouse, but unfortunately, it didn't work > out to add voxels. Can somebody please help me with that? Do I need a middle > button on the mouse for it? > > Attached you may find a slice of the brain data. The red line (indicating the > pial surface) and green line (indicating the grey matter/white matter > boundary) cross, which should not happen in my opinion. Is there any > possibility to change the lines so that they don't cross anymore? > > Cheers, Julia > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
