Thank you. I've tried this command:
mris_anatomical_stats -f AC/stats/lh.aparc.stats -b -a AC/label/lh.aparc.annot -c ./aparc.annot.ctab AC lh pial Would this be appropriate? ines On Fri, May 18, 2012 at 4:32 PM, Douglas N Greve <gr...@nmr.mgh.harvard.edu> wrote: > And you can get the full command line from the > $subject/scripts/recon-all.log file > doug > > On 05/18/2012 10:41 AM, Michael Harms wrote: >> The last argument of mris_anatomical_stats allows you to specify the >> surface to use (pial in your case) >> >> cheers, >> -MH >> >> >> NAME >> mris_anatomical_stats >> >> SYNOPSIS >> mris_anatomical_stats [options]<subjectname> <hemi> >> [<surfacename>] >> >> >> On Fri, 2012-05-18 at 15:18 +0100, Inês Violante wrote: >>> Hi, >>> >>> I need to know the surface area of the structures in the aparc file >>> but I want to obtain this measurement from the pial surface and not >>> the white matter surface. >>> How can I do that? >>> >>> Thank you a lot for your help. >>> >>> ines >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> >>> The information in this e-mail is intended only for the person to whom it is >>> addressed. If you believe this e-mail was sent to you in error and the >>> e-mail >>> contains patient information, please contact the Partners Compliance >>> HelpLine at >>> http://www.partners.org/complianceline . If the e-mail was sent to you in >>> error >>> but does not contain patient information, please contact the sender and >>> properly >>> dispose of the e-mail. >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> > > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
