Hello,
I'm trying to test the effect of thresholds on some sample data. I'd
like to look at how many clusters survive different thresholds.
I also want to filter out really small clusters.
My data have already been projected onto the fsaverage template.
In the simplified case below, I expect a report of clusters >= 10mm^2
whose value is > 1.0.
Does the following command look reasonable?
mri_surfcluster
\
--in
xxx.stat.fsaverage.mgh \
--subject fsaverage \
--hemi
lh \
--surf
inflated \
--thmin
1.0 \
--sign
pos \
--thmax
100.0 \
--no-adjust \
--minarea 10 \
--sum
pos.summary.txt
thanks
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