Hi VP
sorry, the subcortical stuff is needed to automate the cortical surface
modeling, so you need teh whole thing.
We do distribute matlab scripts for reading the surfaces in
(read_surf.m).
cheers
Bruce
On Wed, 6 Mar 2013, Valtina Pouegue
wrote:
Hi, I'm a new user of Freesurfer.
1) I would like to extract only the cortex cerebrum . So I think I don't need
the complete subcortical segmentation (
20-40 hours). Do you know a way to segment only cortex or only ( cortex+ pial
( left/rigt hemispher)?
2) I already try the complete subcortical segmentation ( about 12 hours, with
the recon-all command). Do you know a way
to extract only the cortex surface from the software? I would like to get the
3D surface mesh for analysis on Matlab.
Could you help me,
Thanks.
VP.
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