Yes but I don't want to create a registration template initialized with FS template (fsaverage). That's why I followed the part "creating a registration template from scratch" in this web page http://surfer.nmr.mgh.harvard.edu/fswiki/SurfaceRegAndTemplates
But for annotation I will have to use apart.annot created from ?h.sphere.reg registered on FS template ? We just want to be sure that there is no influence of the template with our data because If I well saw it has been done with 40 subjects aged from 18-87 including 11 Alzheimer's ? Sophie Le 17/04/13 17:19, « Douglas N Greve » <gr...@nmr.mgh.harvard.edu> a écrit : >I'd suggest running make_average_subject which will create tiffs for you >as well as other useful template-specific maps (like an annotation). >doug > >On 04/17/2013 05:48 AM, Sophie Maingault wrote: >> Hi Experts, >> >> I'm creating a template from scratch. When I run mris_make_template is >> it enough to run mris_make_template ?h smoothwm <subjid> my.temp0.tif >> ? My question is about which sphere_name I have to put for argument ? >> I hope I was clear. >> >> Best regards. >> >> Sophie >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > >-- >Douglas N. Greve, Ph.D. >MGH-NMR Center >gr...@nmr.mgh.harvard.edu >Phone Number: 617-724-2358 >Fax: 617-726-7422 > >Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 >www.nmr.mgh.harvard.edu/facility/filedrop/index.html >Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > >_______________________________________________ >Freesurfer mailing list >Freesurfer@nmr.mgh.harvard.edu >https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > >The information in this e-mail is intended only for the person to whom it >is >addressed. If you believe this e-mail was sent to you in error and the >e-mail >contains patient information, please contact the Partners Compliance >HelpLine at >http://www.partners.org/complianceline . If the e-mail was sent to you in >error >but does not contain patient information, please contact the sender and >properly >dispose of the e-mail. > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
